Variant report

Variant	rs7027785
Chromosome Location	chr9:93824836-93824837
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10761105	0.92[AFR][1000 genomes];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2184540	0.83[CHB][hapmap];0.95[CHD][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs296641	0.80[JPT][hapmap]
rs7048338	0.97[AFR][1000 genomes];0.80[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7874712	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:93821800-93826200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr9:93822000-93825800	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr9:93822000-93826400	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr9:93823000-93826200	Enhancers	Psoas Muscle	Psoas
5	chr9:93823400-93825200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr9:93823600-93825400	Enhancers	HepG2	liver
7	chr9:93824000-93825400	Enhancers	Hela-S3	cervix
8	chr9:93824000-93833400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr9:93824400-93825000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr9:93824400-93825200	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr9:93824400-93825200	Enhancers	Lung	lung
12	chr9:93824400-93825800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr9:93824600-93833400	Weak transcription	NHLF	lung
14	chr9:93824800-93825000	Enhancers	Liver	Liver
15	chr9:93824800-93827600	Weak transcription	Esophagus	oesophagus
16	chr9:93824800-93833400	Weak transcription	Spleen	Spleen

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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