The 2.0 version of rSNPBase

Variant report

Variant rs7028504
Chromosome Location chr9:116768206-116768207
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:116732200-116768800 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr9:116732200-116773400 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr9:116733000-116768600 Weak transcription Fetal Kidney kidney
4 chr9:116733400-116800200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr9:116736400-116783000 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr9:116751000-116773400 Weak transcription H1 Cell Line embryonic stem cell
7 chr9:116756200-116773800 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr9:116756400-116775600 Weak transcription Primary B cells from cord blood blood
9 chr9:116756800-116768800 Weak transcription H9 Cell Line embryonic stem cell
10 chr9:116756800-116779000 Weak transcription Esophagus oesophagus
11 chr9:116756800-116783800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
12 chr9:116757000-116770200 Weak transcription Aorta Aorta
13 chr9:116757000-116773600 Weak transcription HMEC breast
14 chr9:116757000-116779600 Weak transcription Colon Smooth Muscle Colon
15 chr9:116757000-116779800 Weak transcription Colonic Mucosa Colon
16 chr9:116757000-116783400 Weak transcription Small Intestine intestine
17 chr9:116757600-116772200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr9:116758400-116775000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr9:116760000-116773400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr9:116760800-116771600 Strong transcription NHLF lung
21 chr9:116762200-116770800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr9:116762200-116772800 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr9:116762200-116775400 Strong transcription Liver Liver
24 chr9:116762200-116780400 Weak transcription Duodenum Mucosa Duodenum
25 chr9:116762400-116776800 Strong transcription Fetal Intestine Large intestine
26 chr9:116763000-116769400 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr9:116763800-116777000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr9:116764000-116772200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr9:116764400-116771000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr9:116764600-116797200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
31 chr9:116765000-116783200 Weak transcription NHEK skin
32 chr9:116765200-116768400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
33 chr9:116765200-116768600 Weak transcription Gastric stomach
34 chr9:116765200-116768800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr9:116765400-116768400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr9:116765400-116769400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr9:116765600-116770800 Weak transcription Spleen Spleen
38 chr9:116765600-116773200 Weak transcription Psoas Muscle Psoas
39 chr9:116765800-116769000 Weak transcription NHDF-Ad bronchial
40 chr9:116765800-116784400 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr9:116766000-116773000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr9:116766000-116784800 Weak transcription Brain Inferior Temporal Lobe brain
43 chr9:116766000-116792600 Weak transcription Stomach Mucosa stomach
44 chr9:116766000-116798000 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr9:116766200-116768600 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr9:116766200-116769400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr9:116766200-116775000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr9:116766200-116799000 Weak transcription Rectal Smooth Muscle rectum
49 chr9:116766400-116774400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr9:116766600-116768800 Strong transcription Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015