Variant report

Variant rs4978562
Chromosome Location chr9:116768637-116768638
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:116732200-116768800 Weak transcription iPS-20b Cell Line embryonic stem cell
2 chr9:116732200-116773400 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr9:116733400-116800200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr9:116736400-116783000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr9:116751000-116773400 Weak transcription H1 Cell Line embryonic stem cell
6 chr9:116756200-116773800 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr9:116756400-116775600 Weak transcription Primary B cells from cord blood blood
8 chr9:116756800-116768800 Weak transcription H9 Cell Line embryonic stem cell
9 chr9:116756800-116779000 Weak transcription Esophagus oesophagus
10 chr9:116756800-116783800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr9:116757000-116770200 Weak transcription Aorta Aorta
12 chr9:116757000-116773600 Weak transcription HMEC breast
13 chr9:116757000-116779600 Weak transcription Colon Smooth Muscle Colon
14 chr9:116757000-116779800 Weak transcription Colonic Mucosa Colon
15 chr9:116757000-116783400 Weak transcription Small Intestine intestine
16 chr9:116757600-116772200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr9:116758400-116775000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr9:116760000-116773400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr9:116760800-116771600 Strong transcription NHLF lung
20 chr9:116762200-116770800 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr9:116762200-116772800 Strong transcription Breast Myoepithelial Primary Cells Breast
22 chr9:116762200-116775400 Strong transcription Liver Liver
23 chr9:116762200-116780400 Weak transcription Duodenum Mucosa Duodenum
24 chr9:116762400-116776800 Strong transcription Fetal Intestine Large intestine
25 chr9:116763000-116769400 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr9:116763800-116777000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr9:116764000-116772200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr9:116764400-116771000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr9:116764600-116797200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr9:116765000-116783200 Weak transcription NHEK skin
31 chr9:116765200-116768800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr9:116765400-116769400 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr9:116765600-116770800 Weak transcription Spleen Spleen
34 chr9:116765600-116773200 Weak transcription Psoas Muscle Psoas
35 chr9:116765800-116769000 Weak transcription NHDF-Ad bronchial
36 chr9:116765800-116784400 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr9:116766000-116773000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr9:116766000-116784800 Weak transcription Brain Inferior Temporal Lobe brain
39 chr9:116766000-116792600 Weak transcription Stomach Mucosa stomach
40 chr9:116766000-116798000 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr9:116766200-116769400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr9:116766200-116775000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr9:116766200-116799000 Weak transcription Rectal Smooth Muscle rectum
44 chr9:116766400-116774400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr9:116766600-116768800 Strong transcription Muscle Satellite Cultured Cells --
46 chr9:116766600-116769200 Strong transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr9:116766600-116782400 Strong transcription A549 lung
48 chr9:116766600-116811200 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr9:116766800-116772000 Strong transcription Ovary ovary
50 chr9:116766800-116775000 Strong transcription Fetal Lung lung

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