Variant report

Variant	rs7032799
Chromosome Location	chr9:73465537-73465538
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10118762	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1034538	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10780973	0.89[ASN][1000 genomes]
rs10780979	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1415225	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2210938	0.92[EUR][1000 genomes]
rs4478638	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6560155	0.91[ASN][1000 genomes]
rs7031089	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7850924	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7873256	0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1803911	chr9:73461480-73466355	Strong transcription Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv1813440	chr9:73461480-73466355	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73427600-73483400	Weak transcription	Aorta	Aorta
2	chr9:73448200-73473600	Weak transcription	Fetal Kidney	kidney
3	chr9:73448400-73469000	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr9:73450600-73477600	Weak transcription	Ovary	ovary
5	chr9:73452000-73469600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr9:73455600-73480600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr9:73457200-73485200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr9:73457800-73480600	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr9:73461400-73482000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr9:73463600-73471000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr9:73463600-73472800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr9:73465400-73466200	Enhancers	Fetal Heart	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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