Variant report
| Variant | rs7034703 |
|---|---|
| Chromosome Location | chr9:14461188-14461189 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr9:14422374..14424364-chr9:14459874..14462842,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:8)
| rs_ID | r2[population] |
|---|---|
| rs10124571 | 0.92[AMR][1000 genomes];0.83[EUR][1000 genomes] |
| rs10124636 | 0.93[AMR][1000 genomes];0.84[EUR][1000 genomes] |
| rs10125616 | 0.85[AMR][1000 genomes] |
| rs10810147 | 0.91[AMR][1000 genomes];0.82[EUR][1000 genomes] |
| rs10961530 | 0.92[ASN][1000 genomes] |
| rs1323339 | 0.85[AMR][1000 genomes] |
| rs16931789 | 0.93[AMR][1000 genomes];0.83[EUR][1000 genomes] |
| rs7031064 | 0.88[ASN][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv1029491 | chr9:14033607-14942373 | Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site | 25 gene(s) | inside rSNPs | diseases |
| 2 | nsv915804 | chr9:14182608-14903050 | Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 23 gene(s) | inside rSNPs | diseases |
| 3 | nsv916811 | chr9:14210978-14542068 | Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Active TSS Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 15 gene(s) | inside rSNPs | diseases |
| 4 | nsv892600 | chr9:14370172-14469146 | Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
| 5 | nsv892602 | chr9:14446001-14472090 | Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| 6 | nsv892603 | chr9:14446001-14475352 | Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Active TSS | Chromatin interactive region | n/a | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr9:14461000-14461600 | Flanking Active TSS | Fetal Heart | heart |
