Variant report

Variant	rs7036850
Chromosome Location	chr9:110491910-110491911
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs1571572	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6477593	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427850	chr9:110456613-110632324	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv428221	chr9:110456613-110632324	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110482800-110495000	Weak transcription	Duodenum Mucosa	Duodenum
2	chr9:110486800-110495400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr9:110490000-110492200	Weak transcription	Fetal Muscle Leg	muscle
4	chr9:110490000-110492800	Weak transcription	HSMMtube	muscle
5	chr9:110490000-110494600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr9:110490000-110494600	Weak transcription	NHLF	lung
7	chr9:110490000-110495200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr9:110490200-110493200	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr9:110490200-110494200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr9:110490200-110494200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
11	chr9:110490200-110494400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr9:110490200-110494400	Weak transcription	Osteobl	bone
13	chr9:110490200-110494600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
14	chr9:110490200-110494600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr9:110490200-110494600	Weak transcription	HSMM	muscle
16	chr9:110490200-110494800	Weak transcription	HUVEC	blood vessel
17	chr9:110490200-110495000	Weak transcription	NH-A	brain
18	chr9:110490200-110495200	Weak transcription	Aorta	Aorta
19	chr9:110490400-110494200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr9:110490400-110494200	Weak transcription	NHDF-Ad	bronchial
21	chr9:110490400-110494400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr9:110491800-110495200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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