Variant report

Variant	rs7070346
Chromosome Location	chr10:23368845-23368846
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:23367339..23368870-chr10:23369442..23371531,2	MCF-7	breast:
2	chr10:23362797..23364395-chr10:23367098..23369288,2	K562	blood:
3	chr10:23365611..23369682-chr10:23369863..23371987,4	K562	blood:

Variant related genes	Relation type
ENSG00000221221	Chromatin interaction

rs_ID	r²[population]
rs1977372	0.84[JPT][hapmap]
rs59658981	0.84[ASN][1000 genomes]
rs61244168	0.84[ASN][1000 genomes]
rs7094224	0.84[ASW][hapmap];0.81[CHB][hapmap];0.89[JPT][hapmap]
rs7094823	0.84[ASW][hapmap];0.88[JPT][hapmap]

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23359000-23369600	Weak transcription	Stomach Smooth Muscle	stomach
2	chr10:23366200-23369200	Weak transcription	Fetal Stomach	stomach
3	chr10:23366400-23370000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr10:23366400-23370200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr10:23366400-23383600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr10:23368600-23369000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr10:23368600-23369000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr10:23368600-23369000	Enhancers	Psoas Muscle	Psoas
9	chr10:23368600-23369200	Enhancers	H1 Cell Line	embryonic stem cell
10	chr10:23368600-23369200	Enhancers	HUES6 Cell Line	embryonic stem cell
11	chr10:23368600-23369200	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr10:23368600-23369200	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr10:23368600-23369200	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
14	chr10:23368600-23369400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
15	chr10:23368600-23369600	Enhancers	iPS-15b Cell Line	embryonic stem cell
16	chr10:23368600-23370000	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr10:23368600-23371200	Enhancers	Fetal Muscle Leg	muscle
18	chr10:23368800-23369000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr10:23368800-23369000	Flanking Bivalent TSS/Enh	Skeletal Muscle Female	skeletal muscle
20	chr10:23368800-23369200	Enhancers	ES-I3 Cell Line	embryonic stem cell
21	chr10:23368800-23369200	Enhancers	H9 Cell Line	embryonic stem cell
22	chr10:23368800-23369200	Enhancers	HUES48 Cell Line	embryonic stem cell
23	chr10:23368800-23369200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
24	chr10:23368800-23369200	Flanking Active TSS	Fetal Kidney	kidney
25	chr10:23368800-23370000	Enhancers	Hela-S3	cervix
26	chr10:23368800-23370200	Weak transcription	Brain Germinal Matrix	brain

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