The 2.0 version of rSNPBase

Variant report

Variant rs61244168
Chromosome Location chr10:23393567-23393568
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:23385800-23395600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr10:23385800-23401800 Weak transcription Brain Germinal Matrix brain
3 chr10:23385800-23409400 Weak transcription NH-A brain
4 chr10:23386000-23412000 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr10:23386400-23393600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr10:23386400-23394600 Weak transcription HSMMtube muscle
7 chr10:23386400-23395400 Weak transcription H1 Cell Line embryonic stem cell
8 chr10:23386400-23395600 Weak transcription Pancreas Pancrea
9 chr10:23386400-23409600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr10:23386400-23411200 Weak transcription Primary B cells from peripheral blood blood
11 chr10:23386400-23411200 Weak transcription Muscle Satellite Cultured Cells --
12 chr10:23386600-23393600 Weak transcription NHLF lung
13 chr10:23386600-23394600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr10:23386600-23397800 Weak transcription NHDF-Ad bronchial
15 chr10:23386600-23398000 Weak transcription GM12878-XiMat blood
16 chr10:23386600-23400600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr10:23386600-23401800 Weak transcription Fetal Brain Male brain
18 chr10:23386600-23403600 Weak transcription Fetal Brain Female brain
19 chr10:23386600-23407800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr10:23386600-23410600 Weak transcription Fetal Thymus thymus
21 chr10:23386600-23412200 Weak transcription Primary T regulatory cells fromperipheralblood blood
22 chr10:23387200-23411400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr10:23387800-23393800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr10:23388800-23405200 Weak transcription Psoas Muscle Psoas
25 chr10:23389000-23394800 Weak transcription Brain Hippocampus Middle brain
26 chr10:23389200-23393600 Weak transcription Brain Substantia Nigra brain
27 chr10:23389200-23402200 Weak transcription HUES6 Cell Line embryonic stem cell
28 chr10:23389200-23407400 Weak transcription Fetal Kidney kidney
29 chr10:23389400-23401200 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr10:23389400-23402000 Weak transcription HUES48 Cell Line embryonic stem cell
31 chr10:23389400-23410600 Weak transcription Stomach Mucosa stomach
32 chr10:23389600-23393800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr10:23389600-23395000 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr10:23389600-23409000 Weak transcription Placenta Amnion Placenta Amnion
35 chr10:23389600-23418600 Weak transcription H9 Cell Line embryonic stem cell
36 chr10:23389800-23399200 Weak transcription HepG2 liver
37 chr10:23389800-23403800 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr10:23390000-23396000 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr10:23390000-23405600 Weak transcription NHEK skin
40 chr10:23390000-23408200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr10:23390000-23411800 Weak transcription HUVEC blood vessel
42 chr10:23390200-23409800 Weak transcription Small Intestine intestine
43 chr10:23390800-23395400 Weak transcription Primary hematopoietic stem cells blood
44 chr10:23391600-23395200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr10:23392200-23396000 Strong transcription Cortex derived primary cultured neurospheres brain
46 chr10:23392400-23404000 Weak transcription Primary B cells from cord blood blood
47 chr10:23392400-23410800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr10:23392600-23393600 Enhancers Fetal Heart heart
49 chr10:23392600-23393600 Genic enhancers Fetal Muscle Leg muscle
50 chr10:23392800-23394600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015