The 2.0 version of rSNPBase

Variant report

Variant rs7100046
Chromosome Location chr10:25204504-25204505
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:25191600-25240600 Weak transcription Stomach Smooth Muscle stomach
2 chr10:25193400-25210200 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr10:25195400-25223400 Weak transcription Fetal Brain Female brain
4 chr10:25196400-25212000 Weak transcription Fetal Stomach stomach
5 chr10:25197400-25205400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr10:25197800-25204600 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr10:25198200-25228000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr10:25198400-25204600 Weak transcription Fetal Intestine Small intestine
9 chr10:25198400-25217800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr10:25199000-25210200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr10:25199200-25210000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr10:25201200-25204600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr10:25201200-25204600 Enhancers Muscle Satellite Cultured Cells --
14 chr10:25201200-25210200 Weak transcription Right Atrium heart
15 chr10:25201400-25210200 Weak transcription Primary T cells fromperipheralblood blood
16 chr10:25201600-25205000 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr10:25201800-25205000 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr10:25202000-25204600 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr10:25202000-25210000 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr10:25202000-25210200 Weak transcription Left Ventricle heart
21 chr10:25202200-25210200 Weak transcription Small Intestine intestine
22 chr10:25202400-25218000 Weak transcription Fetal Lung lung
23 chr10:25202800-25210000 Weak transcription Stomach Mucosa stomach
24 chr10:25203000-25204800 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr10:25203400-25204800 Enhancers Aorta Aorta
26 chr10:25203400-25205200 Enhancers Ovary ovary
27 chr10:25203800-25204600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr10:25204000-25207200 Enhancers K562 blood
29 chr10:25204200-25204600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
30 chr10:25204200-25204800 Enhancers Brain Angular Gyrus brain
31 chr10:25204200-25204800 Enhancers Brain Cingulate Gyrus brain
32 chr10:25204200-25205000 Enhancers Brain Anterior Caudate brain
33 chr10:25204200-25205000 Enhancers Brain Hippocampus Middle brain
34 chr10:25204200-25205200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr10:25204200-25205800 Enhancers Fetal Intestine Large intestine
36 chr10:25204400-25204600 Enhancers Duodenum Mucosa Duodenum
37 chr10:25204400-25204800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr10:25204400-25204800 Enhancers Brain Substantia Nigra brain
39 chr10:25204400-25205000 Enhancers Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015