Variant report

Variant	rs73606578
Chromosome Location	chr10:25132197-25132198
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11014258	0.81[AFR][1000 genomes]
rs11014259	0.81[AFR][1000 genomes]
rs12245230	0.90[AFR][1000 genomes]
rs7100046	1.00[AMR][1000 genomes]
rs73606574	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817326	chr10:25117363-25138323	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25111800-25140000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr10:25115400-25135600	Weak transcription	Brain Cingulate Gyrus	brain
3	chr10:25123200-25138600	Weak transcription	Fetal Intestine Small	intestine
4	chr10:25124200-25138600	Weak transcription	Fetal Stomach	stomach
5	chr10:25126600-25135400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
6	chr10:25130800-25135400	Weak transcription	Brain Hippocampus Middle	brain
7	chr10:25131800-25135000	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr10:25132000-25135400	Weak transcription	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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