Variant report

Variant	rs7108903
Chromosome Location	chr11:72968159-72968160
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:72968010..72971100-chr11:72972272..72977350,4	MCF-7	breast:
2	chr11:72968142..72972004-chr11:72979481..72982441,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000171631	Chromatin interaction

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs60674215	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832208	chr11:72876184-73091003	Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	54 gene(s)	inside rSNPs	diseases
2	esv1821041	chr11:72937162-73113080	Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	50 gene(s)	inside rSNPs	diseases
3	nsv975393	chr11:72954333-72969696	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Strong transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:72954200-72968600	Weak transcription	Left Ventricle	heart
2	chr11:72956600-72968600	Weak transcription	Lung	lung
3	chr11:72960800-72975400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr11:72961200-72968400	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr11:72964200-72968200	Weak transcription	Fetal Heart	heart
6	chr11:72965600-72968400	Weak transcription	HUVEC	blood vessel
7	chr11:72966800-72968400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr11:72966800-72970000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr11:72966800-72971400	Enhancers	Placenta	Placenta
10	chr11:72967000-72970800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr11:72967200-72968600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr11:72967200-72968600	Enhancers	Osteobl	bone
13	chr11:72967200-72970200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr11:72967800-72968200	Enhancers	NHDF-Ad	bronchial
15	chr11:72967800-72968600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr11:72967800-72968600	Enhancers	NH-A	brain
17	chr11:72967800-72969600	Enhancers	HMEC	breast
18	chr11:72967800-72970000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr11:72967800-72971400	Enhancers	Spleen	Spleen
20	chr11:72968000-72968600	Enhancers	Muscle Satellite Cultured Cells	--
21	chr11:72968000-72968600	Enhancers	A549	lung
22	chr11:72968000-72968600	Enhancers	HSMM	muscle
23	chr11:72968000-72968600	Enhancers	HSMMtube	muscle
24	chr11:72968000-72968600	Enhancers	NHEK	skin
25	chr11:72968000-72969600	Enhancers	Breast Myoepithelial Primary Cells	Breast
26	chr11:72968000-72969600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
27	chr11:72968000-72969600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr11:72968000-72969600	Enhancers	Fetal Kidney	kidney
29	chr11:72968000-72971400	Enhancers	Placenta Amnion	Placenta Amnion

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