Variant report

Variant	rs7110351
Chromosome Location	chr11:66082705-66082706
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:66080669..66083117-chr11:66127699..66129564,2	MCF-7	breast:
2	chr11:66055291..66058281-chr11:66079576..66082924,5	MCF-7	breast:
3	chr11:66056386..66058686-chr11:66082623..66084625,3	MCF-7	breast:
4	chr11:66082434..66085363-chr11:66203796..66205513,2	K562	blood:
5	chr11:66079011..66083261-chr11:66109999..66114385,7	MCF-7	breast:
6	chr11:66081995..66084304-chr11:66094378..66096695,2	MCF-7	breast:
7	chr11:66054488..66057665-chr11:66080176..66082833,4	K562	blood:
8	chr11:66081234..66083776-chr11:66137430..66138945,2	MCF-7	breast:
9	chr11:66080788..66082813-chr11:66088055..66089641,2	K562	blood:
10	chr11:66079398..66082242-chr11:66082522..66086120,5	K562	blood:
11	chr11:65656399..65658937-chr11:66080213..66082790,2	K562	blood:
12	chr11:66053947..66059144-chr11:66077550..66083439,18	K562	blood:

No data

Variant related genes	Relation type
ENSG00000175602	Chromatin interaction
ENSG00000254458	Chromatin interaction
ENSG00000174547	Chromatin interaction
ENSG00000174744	Chromatin interaction
ENSG00000174851	Chromatin interaction

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11544832	1.00[CHD][hapmap]
rs11823756	1.00[CHD][hapmap]
rs11825510	1.00[CHD][hapmap]
rs555826	1.00[CHD][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3335923	chr11:65741698-66175759	Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	117 gene(s)	inside rSNPs	diseases
2	esv3407551	chr11:65794503-66158322	Weak transcription Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	103 gene(s)	inside rSNPs	diseases
3	esv3392427	chr11:65981489-66273695	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	118 gene(s)	inside rSNPs	diseases
4	nsv897771	chr11:66011280-66362997	Active TSS Flanking Active TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	124 gene(s)	inside rSNPs	diseases
5	nsv897772	chr11:66018155-66254085	Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS Weak transcription Genic enhancers Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	118 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:66079400-66083000	Active TSS	Rectal Smooth Muscle	rectum
2	chr11:66079400-66083200	Active TSS	Primary T killer naive cells fromperipheralblood	blood
3	chr11:66079400-66083400	Active TSS	Esophagus	oesophagus
4	chr11:66079400-66083600	Active TSS	Psoas Muscle	Psoas
5	chr11:66079400-66085000	Active TSS	Fetal Kidney	kidney
6	chr11:66079400-66085000	Active TSS	Right Atrium	heart
7	chr11:66080400-66083600	Flanking Active TSS	Fetal Thymus	thymus
8	chr11:66080600-66084000	Weak transcription	Aorta	Aorta
9	chr11:66080600-66084400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr11:66080600-66084600	Flanking Active TSS	Adipose Nuclei	Adipose
11	chr11:66080800-66083600	Weak transcription	Pancreatic Islets	Pancreatic Islet
12	chr11:66080800-66084000	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
13	chr11:66080800-66085000	Weak transcription	Liver	Liver
14	chr11:66080800-66085000	Weak transcription	Brain Substantia Nigra	brain
15	chr11:66080800-66085000	Weak transcription	HSMMtube	muscle
16	chr11:66081000-66083600	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr11:66081000-66084600	Weak transcription	Brain Angular Gyrus	brain
18	chr11:66081000-66084800	Weak transcription	HSMM	muscle
19	chr11:66081000-66085000	Enhancers	Primary T helper cells PMA-I stimulated	--
20	chr11:66081000-66085000	Active TSS	Left Ventricle	heart
21	chr11:66081000-66085200	Flanking Active TSS	Osteobl	bone
22	chr11:66081200-66083200	Flanking Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr11:66081200-66083600	Enhancers	Breast Myoepithelial Primary Cells	Breast
24	chr11:66081200-66084400	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr11:66081200-66084800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
26	chr11:66081200-66085000	Active TSS	Rectal Mucosa Donor 31	rectum
27	chr11:66081400-66083000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
28	chr11:66081400-66084000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr11:66081400-66084000	Weak transcription	Brain Inferior Temporal Lobe	brain
30	chr11:66081400-66084200	Weak transcription	Fetal Heart	heart
31	chr11:66081400-66084200	Weak transcription	Small Intestine	intestine
32	chr11:66081400-66084800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
33	chr11:66081400-66084800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
34	chr11:66081400-66084800	Weak transcription	GM12878-XiMat	blood
35	chr11:66081400-66085000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
36	chr11:66081400-66085000	Enhancers	Primary T helper cells fromperipheralblood	blood
37	chr11:66081400-66085000	Weak transcription	A549	lung
38	chr11:66081600-66082800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr11:66081600-66083000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
40	chr11:66081600-66083200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
41	chr11:66081600-66083600	Weak transcription	Muscle Satellite Cultured Cells	--
42	chr11:66081600-66083800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr11:66081600-66083800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr11:66081600-66083800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
45	chr11:66081600-66083800	Weak transcription	Gastric	stomach
46	chr11:66081600-66083800	Weak transcription	Dnd41	blood
47	chr11:66081600-66084000	Active TSS	Duodenum Smooth Muscle	Duodenum
48	chr11:66081600-66084400	Transcr. at gene 5' and 3'	Foreskin Fibroblast Primary Cells skin02	Skin
49	chr11:66081800-66083000	Transcr. at gene 5' and 3'	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr11:66081800-66083000	Enhancers	Duodenum Mucosa	Duodenum

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