Variant report

Variant	rs7111829
Chromosome Location	chr11:45345860-45345861
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs56149423	1.00[AMR][1000 genomes]
rs56222915	1.00[AMR][1000 genomes]
rs56245349	1.00[AMR][1000 genomes]
rs57272528	1.00[AMR][1000 genomes]
rs57619564	1.00[AMR][1000 genomes]
rs59172361	1.00[AMR][1000 genomes]
rs59913855	1.00[AMR][1000 genomes]
rs60624442	1.00[AMR][1000 genomes]
rs60924591	1.00[AMR][1000 genomes]
rs7110477	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530619	chr11:45294176-45553928	Enhancers Bivalent/Poised TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45342400-45346400	Enhancers	Fetal Muscle Leg	muscle
2	chr11:45344200-45346600	Enhancers	Fetal Muscle Trunk	muscle
3	chr11:45344400-45346400	Enhancers	Skeletal Muscle Female	skeletal muscle
4	chr11:45344800-45346000	Enhancers	Skeletal Muscle Male	skeletal muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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