Variant report

Variant	rs7118294
Chromosome Location	chr11:32380521-32380522
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10767932	0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10835890	0.80[ASN][1000 genomes]
rs10835891	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs11031737	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11031754	0.92[YRI][hapmap]
rs1884232	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1997948	0.89[ASN][1000 genomes]
rs2418900	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3818055	0.86[YRI][hapmap]
rs6484569	0.89[CHB][hapmap];0.91[JPT][hapmap];0.90[ASN][1000 genomes]
rs6484570	0.82[CHB][hapmap];0.87[JPT][hapmap];0.90[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32375800-32387600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr11:32379400-32381000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr11:32379800-32380600	Enhancers	Fetal Stomach	stomach
4	chr11:32380200-32380600	Enhancers	Ovary	ovary
5	chr11:32380200-32381000	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
6	chr11:32380400-32380600	Bivalent Enhancer	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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