Variant report

Variant	rs11031754
Chromosome Location	chr11:32394584-32394585
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:32394227..32397866-chr11:32398063..32404136,7	K562	blood:
2	chr11:32394302..32396571-chr11:32451325..32454077,2	K562	blood:
3	chr11:32392237..32394630-chr11:32604009..32606559,2	K562	blood:

Variant related genes	Relation type
ENSG00000149100	Chromatin interaction
ENSG00000184937	Chromatin interaction

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10767933	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10835893	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10835896	0.86[CEU][hapmap]
rs10835904	0.90[JPT][hapmap];0.93[YRI][hapmap];0.87[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs11031755	0.81[CHB][hapmap]
rs11031762	0.86[CEU][hapmap]
rs12290546	0.81[ASN][1000 genomes]
rs12574749	0.95[CEU][hapmap];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs16754	0.80[JPT][hapmap]
rs1799937	0.84[CEU][hapmap];0.90[JPT][hapmap];0.81[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs2234587	0.81[CEU][hapmap];0.90[JPT][hapmap]
rs2295082	0.90[JPT][hapmap]
rs3818055	0.90[JPT][hapmap];0.93[YRI][hapmap];0.83[AMR][1000 genomes]
rs3858445	0.85[JPT][hapmap]
rs5030201	0.81[CEU][hapmap];0.90[JPT][hapmap]
rs5030207	0.90[JPT][hapmap]
rs5030218	0.81[CEU][hapmap];0.86[JPT][hapmap]
rs5030317	0.95[CEU][hapmap];0.90[JPT][hapmap];0.93[YRI][hapmap];0.89[AFR][1000 genomes];0.97[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs5030320	1.00[CEU][hapmap];0.90[JPT][hapmap];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6484569	0.83[CHB][hapmap]
rs6484570	0.89[CHB][hapmap]
rs6484573	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6484574	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6484575	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6484576	1.00[CEU][hapmap];0.90[JPT][hapmap];0.86[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6484577	0.90[JPT][hapmap];0.85[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs7115190	0.83[AMR][1000 genomes]
rs7118294	0.92[YRI][hapmap]
rs7925851	0.86[CEU][hapmap];0.85[CHB][hapmap];0.82[ASN][1000 genomes]
rs7939496	0.84[CEU][hapmap];0.85[CHB][hapmap];0.82[ASN][1000 genomes]
rs7943119	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7951745	0.86[CEU][hapmap];0.85[CHB][hapmap];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3375305	chr11:32388061-32395369	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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