Variant report

Variant	rs10767933
Chromosome Location	chr11:32401585-32401586
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr11:32401045..32403207-chr11:32470669..32473289,2	K562	blood:
2	chr11:32394227..32397866-chr11:32398063..32404136,7	K562	blood:
3	chr11:32399722..32401595-chr11:32443789..32446145,2	K562	blood:
4	chr11:32394931..32398085-chr11:32400583..32404454,5	K562	blood:

Extended variants
information (count: 54 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:53)

rs_ID	r²[population]
rs10767935	0.84[CHB][hapmap]
rs10835893	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10835894	0.83[ASN][1000 genomes]
rs10835896	0.86[CEU][hapmap];0.84[CHB][hapmap];0.81[ASN][1000 genomes]
rs10835903	0.84[CHB][hapmap]
rs10835904	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs10835905	0.84[CHB][hapmap]
rs10835906	0.84[CHB][hapmap]
rs10835907	0.84[CHB][hapmap]
rs11031754	1.00[CEU][hapmap];0.90[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11031757	0.81[ASN][1000 genomes]
rs11031760	0.81[ASN][1000 genomes]
rs11031761	0.81[ASN][1000 genomes]
rs11031762	0.86[CEU][hapmap];0.84[CHB][hapmap];0.81[ASN][1000 genomes]
rs11031767	0.83[CHB][hapmap]
rs11824258	0.83[ASN][1000 genomes]
rs12290546	0.94[ASN][1000 genomes]
rs12574749	0.95[CEU][hapmap];0.84[CHB][hapmap];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs16754	0.94[CHB][hapmap];0.90[JPT][hapmap];0.92[ASN][1000 genomes]
rs16923242	0.84[CHB][hapmap]
rs1799937	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs2234587	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs2295081	0.92[ASN][1000 genomes]
rs2295082	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs3818055	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs3858441	0.84[CHB][hapmap]
rs3858442	0.84[CHB][hapmap]
rs3858445	0.94[CHB][hapmap];0.95[JPT][hapmap];0.84[ASN][1000 genomes]
rs3901671	0.84[CHB][hapmap]
rs5030201	0.81[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs5030203	0.87[JPT][hapmap]
rs5030207	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs5030218	0.81[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.92[ASN][1000 genomes]
rs5030317	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.86[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs5030320	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6484573	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6484574	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6484575	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6484576	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6484577	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs7107082	0.92[ASN][1000 genomes]
rs7115190	0.83[AMR][1000 genomes];0.87[ASN][1000 genomes]
rs7116169	0.81[ASN][1000 genomes]
rs7116462	0.80[ASN][1000 genomes]
rs7118294	0.83[YRI][hapmap]
rs7925851	0.86[CEU][hapmap]
rs7926521	0.81[ASN][1000 genomes]
rs7926620	0.81[ASN][1000 genomes]
rs7938016	0.84[CHB][hapmap]
rs7939496	0.84[CEU][hapmap]
rs7943119	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7946388	0.81[ASN][1000 genomes]
rs7951745	0.86[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832108	chr11:32395937-32560583	Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32396400-32407800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr11:32401000-32401800	Enhancers	K562	blood
3	chr11:32401200-32404200	Enhancers	Fetal Heart	heart
4	chr11:32401400-32401800	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
5	chr11:32401400-32402200	Enhancers	Placenta	Placenta

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