Variant report

Variant	rs7951745
Chromosome Location	chr11:32392395-32392396
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32392237..32394630-chr11:32604009..32606559,2	K562	blood:

Variant related genes	Relation type
ENSG00000149100	Chromatin interaction

Extended variants
information (count: 90 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:87)

rs_ID	r²[population]
rs10767934	0.81[ASN][1000 genomes]
rs10767935	0.82[CEU][hapmap];0.90[JPT][hapmap];0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10835892	0.84[ASN][1000 genomes]
rs10835894	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10835896	1.00[CEU][hapmap];0.90[JPT][hapmap];0.96[YRI][hapmap];0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10835897	0.83[ASN][1000 genomes]
rs10835900	0.94[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs10835901	0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10835903	0.82[CEU][hapmap];0.90[JPT][hapmap];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10835905	0.84[CEU][hapmap];0.90[JPT][hapmap];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10835906	0.84[CEU][hapmap];0.90[JPT][hapmap];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10835907	0.84[CEU][hapmap];0.90[JPT][hapmap]
rs11031744	0.81[ASN][1000 genomes]
rs11031745	0.81[ASN][1000 genomes]
rs11031746	0.81[ASN][1000 genomes]
rs11031748	0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11031754	0.86[CEU][hapmap];0.85[CHB][hapmap];0.82[ASN][1000 genomes]
rs11031755	0.95[CHB][hapmap];0.90[JPT][hapmap];0.95[ASN][1000 genomes]
rs11031757	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11031760	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11031761	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11031762	1.00[CEU][hapmap];0.90[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11031763	0.82[ASN][1000 genomes]
rs11031767	0.90[JPT][hapmap];0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs11031769	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs11031770	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12224661	0.84[EUR][1000 genomes]
rs12365223	0.95[ASN][1000 genomes]
rs12365511	0.84[ASN][1000 genomes]
rs12574749	0.89[CEU][hapmap];0.90[JPT][hapmap];0.87[AMR][1000 genomes];0.84[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1569776	0.80[JPT][hapmap]
rs16923242	0.84[CEU][hapmap];0.90[JPT][hapmap];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1799937	0.88[CEU][hapmap];0.85[AMR][1000 genomes]
rs2234587	0.85[CEU][hapmap]
rs2295082	0.82[CEU][hapmap]
rs2418901	0.81[ASN][1000 genomes]
rs2418902	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2418903	0.81[ASN][1000 genomes]
rs2418904	0.81[ASN][1000 genomes]
rs2418905	0.81[ASN][1000 genomes]
rs2418906	0.81[ASN][1000 genomes]
rs2418907	0.81[ASN][1000 genomes]
rs2418908	0.81[ASN][1000 genomes]
rs3847589	0.81[JPT][hapmap]
rs3858434	0.81[ASN][1000 genomes]
rs3858436	0.81[ASN][1000 genomes]
rs3858437	0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3858439	0.82[ASN][1000 genomes]
rs3858440	0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3858441	0.82[CEU][hapmap];0.90[JPT][hapmap];0.94[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3858442	0.84[CEU][hapmap];0.90[JPT][hapmap];0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3858443	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3901671	0.82[CEU][hapmap];0.90[JPT][hapmap];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs3932463	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs4140414	0.81[ASN][1000 genomes]
rs5030201	0.84[CEU][hapmap]
rs5030207	0.82[CEU][hapmap]
rs5030218	0.84[CEU][hapmap]
rs5030241	0.81[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs5030277	0.81[JPT][hapmap];0.82[ASN][1000 genomes]
rs5030280	0.81[JPT][hapmap];0.82[ASN][1000 genomes]
rs5030281	0.81[JPT][hapmap];0.82[ASN][1000 genomes]
rs5030310	0.81[JPT][hapmap];0.83[ASN][1000 genomes]
rs5030320	0.84[CEU][hapmap]
rs56911719	0.92[ASN][1000 genomes]
rs58222320	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58736369	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs59666608	0.95[ASN][1000 genomes]
rs61889189	0.86[EUR][1000 genomes]
rs61889206	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6484573	0.82[ASN][1000 genomes]
rs6484574	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6484576	0.85[CEU][hapmap]
rs7101933	0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7105538	0.89[EUR][1000 genomes]
rs7105549	0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7108339	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7116169	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7125543	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7125816	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7925851	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7926521	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7926620	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7938016	0.82[CEU][hapmap];0.90[JPT][hapmap];0.92[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7939496	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7943119	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7946388	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3403524	chr11:32387376-32392574	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3375305	chr11:32388061-32395369	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	esv3485561	chr11:32388235-32392721	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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