Variant report

Variant	rs61889206
Chromosome Location	chr11:32394054-32394055
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:32392237..32394630-chr11:32604009..32606559,2	K562	blood:

Variant related genes	Relation type
ENSG00000149100	Chromatin interaction

Extended variants
information (count: 44 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10767935	0.89[AMR][1000 genomes]
rs10835894	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10835896	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10835900	0.89[AMR][1000 genomes]
rs10835901	0.89[AMR][1000 genomes]
rs10835903	0.87[AMR][1000 genomes]
rs10835905	0.87[AMR][1000 genomes]
rs10835906	0.87[AMR][1000 genomes]
rs11031748	0.82[EUR][1000 genomes]
rs11031755	0.84[ASN][1000 genomes]
rs11031757	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11031760	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11031761	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11031762	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11031769	0.88[AMR][1000 genomes]
rs11031770	0.88[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs12365223	0.84[ASN][1000 genomes]
rs12574749	0.82[AMR][1000 genomes]
rs16923242	0.87[AMR][1000 genomes]
rs1799937	0.81[AMR][1000 genomes]
rs3858440	0.89[AMR][1000 genomes]
rs3858441	0.89[AMR][1000 genomes]
rs3858442	0.89[AMR][1000 genomes]
rs3858443	0.88[AMR][1000 genomes]
rs3901671	0.87[AMR][1000 genomes]
rs56911719	0.81[ASN][1000 genomes]
rs58222320	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs58736369	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59666608	0.84[ASN][1000 genomes]
rs6484574	0.87[AMR][1000 genomes]
rs7105549	0.84[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7108339	0.82[AMR][1000 genomes]
rs7116169	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7125543	0.87[AMR][1000 genomes]
rs7125816	0.80[AMR][1000 genomes]
rs7925851	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7926521	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7926620	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7938016	0.87[AMR][1000 genomes]
rs7939496	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7943119	0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs7946388	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7951745	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3375305	chr11:32388061-32395369	Enhancers Weak transcription	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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