Variant report

Variant	rs11031748
Chromosome Location	chr11:32387435-32387436
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 68 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:67)

rs_ID	r²[population]
rs10767935	0.82[CEU][hapmap];0.81[JPT][hapmap]
rs10835892	0.88[ASN][1000 genomes]
rs10835894	0.92[EUR][1000 genomes]
rs10835896	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs10835903	0.83[CEU][hapmap]
rs10835905	0.85[CEU][hapmap]
rs10835906	0.85[CEU][hapmap]
rs10835907	0.85[CEU][hapmap]
rs11031744	0.85[ASN][1000 genomes]
rs11031745	0.85[ASN][1000 genomes]
rs11031746	0.85[ASN][1000 genomes]
rs11031747	0.83[ASN][1000 genomes]
rs11031749	0.88[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs11031754	0.86[CEU][hapmap]
rs11031757	0.92[EUR][1000 genomes]
rs11031760	0.91[EUR][1000 genomes]
rs11031761	0.91[EUR][1000 genomes]
rs11031762	1.00[CEU][hapmap];0.91[EUR][1000 genomes]
rs12224661	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12574749	0.89[CEU][hapmap];0.81[JPT][hapmap]
rs16923171	0.83[ASN][1000 genomes]
rs16923174	0.83[ASN][1000 genomes]
rs16923242	0.84[CEU][hapmap]
rs1799937	0.88[CEU][hapmap]
rs2234587	0.85[CEU][hapmap]
rs2295082	0.83[CEU][hapmap]
rs2418901	0.85[ASN][1000 genomes]
rs2418902	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2418903	0.85[ASN][1000 genomes]
rs2418904	0.85[ASN][1000 genomes]
rs2418905	0.85[ASN][1000 genomes]
rs2418906	0.85[ASN][1000 genomes]
rs2418907	0.85[ASN][1000 genomes]
rs2418908	0.85[ASN][1000 genomes]
rs3858434	0.85[ASN][1000 genomes]
rs3858435	0.83[ASN][1000 genomes]
rs3858436	0.85[ASN][1000 genomes]
rs3858437	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3858438	0.83[ASN][1000 genomes]
rs3858439	0.85[ASN][1000 genomes]
rs3858441	0.82[CEU][hapmap];0.81[JPT][hapmap]
rs3858442	0.84[CEU][hapmap]
rs3901671	0.82[CEU][hapmap];0.81[JPT][hapmap]
rs5030201	0.85[CEU][hapmap]
rs5030207	0.83[CEU][hapmap]
rs5030218	0.85[CEU][hapmap]
rs5030320	0.84[CEU][hapmap]
rs56911719	0.91[ASN][1000 genomes]
rs58222320	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs58736369	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61889189	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs61889206	0.82[EUR][1000 genomes]
rs6484574	0.82[EUR][1000 genomes]
rs6484576	0.86[CEU][hapmap]
rs7101933	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7105538	0.91[EUR][1000 genomes]
rs7105549	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7108339	0.80[CEU][hapmap]
rs7116169	0.92[EUR][1000 genomes]
rs7925851	1.00[CEU][hapmap];0.80[CHB][hapmap];0.86[JPT][hapmap];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7926521	0.92[EUR][1000 genomes]
rs7926620	0.92[EUR][1000 genomes]
rs7938016	0.82[CEU][hapmap];0.81[JPT][hapmap]
rs7939496	1.00[CEU][hapmap];0.90[JPT][hapmap];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7943119	0.83[ASN][1000 genomes]
rs7946388	0.92[EUR][1000 genomes]
rs7951745	1.00[CEU][hapmap];0.80[CHB][hapmap];0.90[JPT][hapmap];0.92[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3403524	chr11:32387376-32392574	Weak transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32375800-32387600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr11:32386800-32387600	Active TSS	K562	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links