The 2.0 version of rSNPBase

Variant report

Variant rs712550
Chromosome Location chr5:114945634-114945635
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:114937800-114951600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr5:114938200-114957200 Weak transcription Small Intestine intestine
3 chr5:114938200-114958200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr5:114938200-114960200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr5:114938400-114951400 Weak transcription HepG2 liver
6 chr5:114938600-114948400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
7 chr5:114938600-114949600 Weak transcription H1 Cell Line embryonic stem cell
8 chr5:114938600-114949600 Weak transcription Primary T regulatory cells fromperipheralblood blood
9 chr5:114938600-114949800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr5:114938600-114950000 Weak transcription Fetal Intestine Large intestine
11 chr5:114938600-114950000 Weak transcription HSMMtube muscle
12 chr5:114938600-114950200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr5:114938600-114951600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr5:114938600-114951800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr5:114938600-114951800 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr5:114938600-114951800 Weak transcription Esophagus oesophagus
17 chr5:114938600-114958000 Weak transcription Ovary ovary
18 chr5:114938600-114960000 Weak transcription H9 Cell Line embryonic stem cell
19 chr5:114938800-114946000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr5:114938800-114947600 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr5:114938800-114948400 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr5:114938800-114948400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr5:114938800-114949600 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr5:114938800-114949600 Weak transcription Hela-S3 cervix
25 chr5:114938800-114950000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr5:114938800-114950200 Weak transcription Primary T cells from cord blood blood
27 chr5:114938800-114951600 Weak transcription K562 blood
28 chr5:114938800-114951800 Weak transcription Fetal Muscle Trunk muscle
29 chr5:114938800-114951800 Weak transcription Thymus Thymus
30 chr5:114938800-114951800 Weak transcription NHLF lung
31 chr5:114938800-114952000 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr5:114938800-114953800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr5:114938800-114954000 Weak transcription Fetal Brain Female brain
34 chr5:114938800-114954200 Weak transcription Brain Inferior Temporal Lobe brain
35 chr5:114938800-114954200 Weak transcription Colonic Mucosa Colon
36 chr5:114938800-114957400 Weak transcription Aorta Aorta
37 chr5:114938800-114958600 Weak transcription Right Ventricle heart
38 chr5:114938800-114960000 Weak transcription Lung lung
39 chr5:114939000-114946200 Weak transcription Muscle Satellite Cultured Cells --
40 chr5:114939000-114946200 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr5:114939000-114946200 Weak transcription NH-A brain
42 chr5:114939000-114947400 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr5:114939000-114947800 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr5:114939000-114947800 Weak transcription HUVEC blood vessel
45 chr5:114939000-114948000 Weak transcription Fetal Lung lung
46 chr5:114939000-114948400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr5:114939000-114949400 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr5:114939000-114949600 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr5:114939000-114950000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr5:114939000-114950200 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015