Variant report
Variant | rs712561 |
---|---|
Chromosome Location | chr5:115552945-115552946 |
allele | A/C |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10042177 | 0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs10051072 | 0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs10051302 | 0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];1.00[YRI][hapmap];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs10056823 | 1.00[ASW][hapmap];0.95[CEU][hapmap];0.85[LWK][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.87[EUR][1000 genomes] |
rs10062347 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs10063312 | 0.91[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10063392 | 0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs10066026 | 0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs10066081 | 0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs10073458 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs10075063 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap] |
rs10075195 | 0.96[CEU][hapmap];0.96[CHB][hapmap];0.95[JPT][hapmap] |
rs10077013 | 0.88[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs10078121 | 0.91[CHB][hapmap] |
rs10079176 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap] |
rs10079466 | 0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs10079691 | 0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs10463453 | 0.87[CHB][hapmap] |
rs10478280 | 0.85[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs1090077 | 0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes] |
rs11241352 | 0.95[CHB][hapmap];0.90[JPT][hapmap] |
rs11241364 | 0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11241365 | 0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11241366 | 0.83[EUR][1000 genomes] |
rs11241371 | 0.81[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs11241372 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs11241374 | 0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs11241375 | 0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs1129494 | 0.95[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap] |
rs1133187 | 0.95[CEU][hapmap];0.95[CHB][hapmap];0.89[JPT][hapmap] |
rs11739600 | 0.82[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs11742938 | 0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs11951865 | 0.82[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs11953135 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs11960815 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs12054994 | 0.87[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs12109104 | 0.95[CEU][hapmap];0.95[CHB][hapmap];0.84[JPT][hapmap];0.86[EUR][1000 genomes] |
rs12332433 | 0.81[EUR][1000 genomes] |
rs12657249 | 0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.91[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes] |
rs13157583 | 0.83[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap] |
rs13159102 | 0.88[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes] |
rs13161146 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs13161987 | 0.88[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs13162293 | 0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.89[ASN][1000 genomes] |
rs13172482 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap] |
rs13180407 | 0.82[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs13181756 | 0.83[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs1382343 | 0.85[EUR][1000 genomes] |
rs1382344 | 0.85[EUR][1000 genomes] |
rs1396478 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap] |
rs1396481 | 0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.82[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs1396482 | 0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs149131 | 0.82[EUR][1000 genomes] |
rs1508875 | 0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs153593 | 0.83[EUR][1000 genomes] |
rs153594 | 0.83[EUR][1000 genomes] |
rs1567335 | 0.87[CEU][hapmap];0.81[AMR][1000 genomes] |
rs1588267 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap] |
rs1644268 | 0.81[EUR][1000 genomes] |
rs1669135 | 0.95[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap];0.83[EUR][1000 genomes] |
rs1669136 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.85[EUR][1000 genomes] |
rs1677405 | 0.96[CEU][hapmap] |
rs1677406 | 0.96[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];0.85[EUR][1000 genomes] |
rs173813 | 0.82[EUR][1000 genomes] |
rs173834 | 0.88[CHB][hapmap] |
rs185263 | 0.91[CHB][hapmap] |
rs2063253 | 0.82[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs2416430 | 0.81[EUR][1000 genomes] |
rs253950 | 0.95[CEU][hapmap];1.00[CHB][hapmap];0.84[JPT][hapmap];0.83[EUR][1000 genomes] |
rs253951 | 0.83[EUR][1000 genomes] |
rs253952 | 0.83[EUR][1000 genomes] |
rs253959 | 1.00[ASW][hapmap];0.95[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];0.93[LWK][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes] |
rs254150 | 0.83[CHB][hapmap] |
rs254151 | 0.91[CHB][hapmap] |
rs254152 | 0.82[CHB][hapmap] |
rs254171 | 0.96[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs254172 | 0.96[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs254173 | 0.96[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs254174 | 0.95[CEU][hapmap];0.95[CHB][hapmap];0.84[JPT][hapmap];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs27125 | 0.83[EUR][1000 genomes] |
rs37180 | 0.83[EUR][1000 genomes] |
rs40192 | 0.83[EUR][1000 genomes] |
rs41271 | 0.83[EUR][1000 genomes] |
rs42959 | 0.87[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs55783029 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes] |
rs6594938 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap] |
rs6594948 | 0.92[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs6594951 | 0.84[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs6594952 | 0.86[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs6871132 | 0.82[YRI][hapmap] |
rs6876901 | 0.96[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap] |
rs6894046 | 0.81[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap] |
rs6896479 | 0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap] |
rs7715759 | 0.83[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7723358 | 0.91[CEU][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs7730551 | 0.95[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap] |
rs7732346 | 0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes] |
rs7733128 | 0.82[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7735539 | 0.91[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs7736189 | 0.82[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs784479 | 0.96[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];0.86[EUR][1000 genomes] |
rs784481 | 0.86[EUR][1000 genomes] |
rs785367 | 0.82[CHB][hapmap] |
rs803967 | 0.96[CEU][hapmap];0.96[CHB][hapmap];0.85[JPT][hapmap];0.87[EUR][1000 genomes] |
rs809188 | 0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes] |
rs809210 | 0.95[CEU][hapmap];0.84[EUR][1000 genomes] |
rs810742 | 0.86[EUR][1000 genomes] |
rs9326987 | 0.95[CEU][hapmap];1.00[CHB][hapmap];0.95[JPT][hapmap] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv882736 | chr5:115254723-115552945 | Weak transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 25 gene(s) | inside rSNPs | diseases |
2 | nsv882737 | chr5:115263853-115552945 | Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 25 gene(s) | inside rSNPs | diseases |
3 | esv34146 | chr5:115315944-115729919 | Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 29 gene(s) | inside rSNPs | diseases |
4 | nsv527320 | chr5:115382097-115573543 | Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 20 gene(s) | inside rSNPs | diseases |
5 | esv2755349 | chr5:115384101-115733101 | Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 24 gene(s) | inside rSNPs | diseases |
6 | nsv1019972 | chr5:115386860-115563533 | Flanking Active TSS Enhancers Active TSS Strong transcription Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
7 | nsv537869 | chr5:115386860-115563533 | Strong transcription Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 19 gene(s) | inside rSNPs | diseases |
8 | nsv1018861 | chr5:115397834-115563533 | Active TSS Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 17 gene(s) | inside rSNPs | diseases |
9 | nsv537870 | chr5:115397834-115563533 | Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 17 gene(s) | inside rSNPs | diseases |
10 | nsv882739 | chr5:115471015-115552945 | Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
11 | nsv882741 | chr5:115484252-115552945 | Weak transcription Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
12 | nsv1032531 | chr5:115489694-115583800 | Enhancers ZNF genes & repeats Weak transcription Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS Flanking Active TSS | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
13 | nsv882742 | chr5:115489770-115584159 | ZNF genes & repeats Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
14 | nsv1034069 | chr5:115490345-115563533 | Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
15 | nsv537873 | chr5:115490345-115563533 | Weak transcription Active TSS Enhancers Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
16 | nsv882743 | chr5:115501792-115634127 | Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 4 gene(s) | inside rSNPs | diseases |
17 | nsv1023880 | chr5:115508328-115563533 | Weak transcription Strong transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
18 | nsv537874 | chr5:115508328-115563533 | ZNF genes & repeats Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
19 | nsv1021381 | chr5:115509949-115568193 | Weak transcription ZNF genes & repeats Enhancers Strong transcription Active TSS Flanking Active TSS | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
20 | nsv524812 | chr5:115517238-115584159 | Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Active TSS Bivalent/Poised TSS | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
21 | nsv1028993 | chr5:115523717-115563533 | Enhancers Weak transcription Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
22 | nsv537875 | chr5:115523717-115563533 | ZNF genes & repeats Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
23 | nsv1019540 | chr5:115526349-115610020 | Weak transcription ZNF genes & repeats Enhancers Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
24 | esv2752058 | chr5:115533065-115605198 | Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Strong transcription Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
25 | nsv1016585 | chr5:115533065-115605455 | Strong transcription Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
26 | nsv1032799 | chr5:115533065-115609552 | Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Enhancers Bivalent/Poised TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
27 | nsv1016924 | chr5:115533065-115610020 | Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent/Poised TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
28 | nsv599481 | chr5:115540041-115609552 | Enhancers ZNF genes & repeats Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
29 | nsv1018738 | chr5:115540586-115553256 | Enhancers Weak transcription | lncRNA | n/a | inside rSNPs | diseases |
30 | nsv1028663 | chr5:115540586-115586834 | Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
31 | nsv1024670 | chr5:115540586-115615459 | Weak transcription Enhancers ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
32 | nsv519321 | chr5:115541563-115584159 | Strong transcription Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Enhancers Active TSS | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
33 | nsv462401 | chr5:115541563-115609552 | Strong transcription Weak transcription ZNF genes & repeats Enhancers Bivalent/Poised TSS Flanking Active TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
34 | nsv599482 | chr5:115541563-115609552 | Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Active TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
35 | nsv521050 | chr5:115541563-115617297 | Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
36 | nsv980718 | chr5:115552636-115554415 | Weak transcription | TF binding regionChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:115525800-115560000 | Weak transcription | Left Ventricle | heart |
2 | chr5:115537200-115559400 | Weak transcription | Primary B cells from cord blood | blood |
3 | chr5:115537400-115560000 | Weak transcription | Primary T cells from cord blood | blood |
4 | chr5:115537600-115560200 | Weak transcription | Primary hematopoietic stem cells | blood |
5 | chr5:115542600-115562800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
6 | chr5:115549800-115560000 | Weak transcription | Fetal Intestine Small | intestine |
7 | chr5:115550400-115556400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
8 | chr5:115551800-115576400 | Weak transcription | Primary T helper cells fromperipheralblood | blood |