The 2.0 version of rSNPBase

Variant report

Variant rs714344
Chromosome Location chr5:148189411-148189412
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:148184600-148190200 Enhancers HUVEC blood vessel
2 chr5:148184800-148190600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
3 chr5:148186200-148190400 Enhancers Fetal Lung lung
4 chr5:148186400-148191200 Enhancers Fetal Heart heart
5 chr5:148186400-148205400 Weak transcription Aorta Aorta
6 chr5:148186600-148195000 Weak transcription Brain Anterior Caudate brain
7 chr5:148187000-148189800 Flanking Active TSS Primary B cells from cord blood blood
8 chr5:148187800-148191200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr5:148188200-148189600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr5:148188400-148189600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
11 chr5:148188400-148189600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
12 chr5:148188400-148189600 Flanking Active TSS Hela-S3 cervix
13 chr5:148188600-148189600 Active TSS Primary T helper naive cells fromperipheralblood blood
14 chr5:148188600-148189600 Active TSS Thymus Thymus
15 chr5:148188600-148189600 Active TSS A549 lung
16 chr5:148188600-148189600 Flanking Active TSS HMEC breast
17 chr5:148188600-148189800 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr5:148188600-148195000 Weak transcription Spleen Spleen
19 chr5:148188800-148189600 Active TSS Primary T cells fromperipheralblood blood
20 chr5:148188800-148189600 Enhancers Fetal Stomach stomach
21 chr5:148188800-148189600 Active TSS Rectal Mucosa Donor 29 rectum
22 chr5:148188800-148191200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr5:148189000-148189600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr5:148189000-148190200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr5:148189000-148190200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr5:148189000-148195000 Weak transcription Esophagus oesophagus
27 chr5:148189000-148204800 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr5:148189000-148205200 Weak transcription Psoas Muscle Psoas
29 chr5:148189200-148189600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
30 chr5:148189200-148189600 Flanking Active TSS NHLF lung
31 chr5:148189200-148190000 Flanking Active TSS Primary T cells from cord blood blood
32 chr5:148189200-148190200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr5:148189200-148190200 Enhancers Small Intestine intestine
34 chr5:148189200-148194400 Weak transcription Brain Inferior Temporal Lobe brain
35 chr5:148189200-148194600 Weak transcription Brain Hippocampus Middle brain
36 chr5:148189200-148196200 Weak transcription Adipose Nuclei Adipose
37 chr5:148189400-148189600 Flanking Active TSS Primary B cells from peripheral blood blood
38 chr5:148189400-148189600 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
39 chr5:148189400-148189600 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
40 chr5:148189400-148189600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
41 chr5:148189400-148189600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
42 chr5:148189400-148189600 Flanking Active TSS Duodenum Mucosa Duodenum
43 chr5:148189400-148189600 Flanking Active TSS NHEK skin
44 chr5:148189400-148189800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
45 chr5:148189400-148190000 Flanking Active TSS GM12878-XiMat blood
46 chr5:148189400-148190200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
47 chr5:148189400-148190200 Enhancers Fetal Thymus thymus
48 chr5:148189400-148190200 Enhancers Rectal Mucosa Donor 31 rectum
49 chr5:148189400-148190400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
50 chr5:148189400-148190800 Enhancers Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015