Variant report

Variant	rs9325118
Chromosome Location	chr5:148175632-148175633
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs10059242	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10064810	1.00[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17108773	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59071776	0.85[AMR][1000 genomes]
rs714344	0.83[ASN][1000 genomes]
rs73795143	0.85[AMR][1000 genomes]
rs73795146	0.85[AMR][1000 genomes]
rs73795147	0.85[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv883021	chr5:148060817-148182123	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:148170400-148175800	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr5:148171600-148176200	Weak transcription	Lung	lung
3	chr5:148171800-148176200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr5:148172000-148178200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr5:148172200-148175800	Enhancers	Osteobl	bone
6	chr5:148173400-148176600	Weak transcription	HMEC	breast
7	chr5:148173400-148178000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr5:148173600-148175800	Enhancers	Primary neutrophils fromperipheralblood	blood
9	chr5:148173800-148175800	Enhancers	Primary B cells from cord blood	blood
10	chr5:148174400-148177600	Weak transcription	NHDF-Ad	bronchial
11	chr5:148175200-148175800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr5:148175200-148176800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr5:148175200-148178600	Weak transcription	Muscle Satellite Cultured Cells	--
14	chr5:148175200-148180200	Weak transcription	K562	blood
15	chr5:148175200-148181200	Weak transcription	Primary hematopoietic stem cells	blood
16	chr5:148175400-148179200	Weak transcription	Monocytes-CD14+_RO01746	blood
17	chr5:148175400-148181400	Weak transcription	GM12878-XiMat	blood
18	chr5:148175600-148179000	Weak transcription	Primary monocytes fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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