Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10507961	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10507962	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12428918	0.81[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12865751	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12876177	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1502070	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17650224	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17650379	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs34060192	0.83[EUR][1000 genomes]
rs34618989	0.83[EUR][1000 genomes]
rs35151821	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35482231	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35581488	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35870429	0.83[EUR][1000 genomes]
rs4772408	0.81[ASN][1000 genomes]
rs56903670	0.83[EUR][1000 genomes]
rs57073992	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60897284	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs66846950	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs71442127	0.83[EUR][1000 genomes]
rs71442128	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047136	chr13:86979109-87555131	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	esv2763045	chr13:87005617-87079364	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers	lncRNA	n/a	inside rSNPs	diseases
3	nsv1048247	chr13:87041270-87073440	Enhancers Weak transcription Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases
4	nsv1039541	chr13:87049807-87087605	Enhancers Weak transcription Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases
5	nsv1041124	chr13:87049807-87100950	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:87054600-87055600	Enhancers	Fetal Brain Male	brain

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