Variant report

Variant	rs7149400
Chromosome Location	chr14:85718069-85718070
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1620072	0.82[YRI][hapmap];1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1667500	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1767395	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1767399	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs1767425	0.91[ASW][hapmap]
rs1767426	0.83[ASW][hapmap]
rs59655378	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs61098303	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8007147	0.89[AMR][1000 genomes]
rs9323753	1.00[AMR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422273	chr14:85703149-85767292	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85709400-85718200	Weak transcription	HSMMtube	muscle
2	chr14:85715200-85719000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:85716000-85718200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr14:85716000-85718400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr14:85716000-85718400	Weak transcription	Hela-S3	cervix
6	chr14:85716200-85718200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr14:85716600-85719000	Enhancers	HUVEC	blood vessel
8	chr14:85716800-85718200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr14:85717200-85727800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr14:85717400-85723400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr14:85717800-85719200	Enhancers	HMEC	breast
12	chr14:85717800-85719800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr14:85717800-85720600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
14	chr14:85718000-85719000	Enhancers	Muscle Satellite Cultured Cells	--
15	chr14:85718000-85719000	Enhancers	NHEK	skin
16	chr14:85718000-85719000	Enhancers	Osteobl	bone

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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