Variant report

Variant	rs71537958
Chromosome Location	chr7:150065559-150065560
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr7:150064930-150072034	GM12878	blood:	n/a	n/a
2	MAX	chr7:150065001-150066897	GM12878	blood:	n/a	chr7:150066414-150066424 chr7:150065597-150065604 chr7:150065226-150065233 chr7:150065225-150065234 chr7:150065861-150065870 chr7:150065861-150065870 chr7:150065594-150065604 chr7:150065688-150065697 chr7:150065692-150065701 chr7:150065595-150065604 chr7:150065223-150065232 chr7:150065860-150065871
3	CREB1	chr7:150065368-150066452	A549	lung:	n/a	n/a
4	POLR2A	chr7:150064990-150066746	PANC-1	pancreas:	n/a	n/a
5	TAF1	chr7:150065062-150066798	K562	blood:	n/a	n/a
6	MXI1	chr7:150065051-150066705	K562	blood:	n/a	chr7:150065688-150065703 chr7:150065860-150065869 chr7:150065686-150065701
7	JUND	chr7:150064857-150065857	MCF-7	breast:	n/a	chr7:150065148-150065159 chr7:150065151-150065158 chr7:150065148-150065159 chr7:150065149-150065158
8	SPI1	chr7:150064912-150065562	HL-60	blood:	n/a	chr7:150065278-150065285
9	POLR2A	chr7:150064983-150066722	HUVEC	blood vessel:	n/a	n/a
10	POU2F2	chr7:150064993-150066988	GM12878	blood:	n/a	chr7:150066155-150066167
11	BHLHE40	chr7:150064954-150066889	GM12878	blood:	n/a	chr7:150066358-150066374
12	PAX5	chr7:150065312-150066455	GM12892	blood:	n/a	chr7:150066245-150066264 chr7:150066267-150066284
13	MYC	chr7:150064797-150066853	K562	blood:	n/a	chr7:150066414-150066424 chr7:150065597-150065604 chr7:150065226-150065233 chr7:150065225-150065234 chr7:150065861-150065870 chr7:150065861-150065870 chr7:150065594-150065604 chr7:150065688-150065697 chr7:150065692-150065701 chr7:150065595-150065604 chr7:150065223-150065232 chr7:150065860-150065871
14	EP300	chr7:150065031-150066727	K562	blood:	n/a	chr7:150066306-150066322 chr7:150065149-150065158 chr7:150065456-150065472
15	MXI1	chr7:150064972-150066722	Hela-S3	cervix:	n/a	chr7:150065688-150065703 chr7:150065860-150065869 chr7:150065686-150065701
16	MAX	chr7:150065005-150066871	SK-N-SH	brain:	n/a	chr7:150066414-150066424 chr7:150065597-150065604 chr7:150065226-150065233 chr7:150065225-150065234 chr7:150065861-150065870 chr7:150065861-150065870 chr7:150065594-150065604 chr7:150065688-150065697 chr7:150065692-150065701 chr7:150065595-150065604 chr7:150065223-150065232 chr7:150065860-150065871
17	POLR2A	chr7:150065073-150066560	A549	lung:	n/a	n/a
18	POLR2A	chr7:150065018-150068478	GM12878	blood:	n/a	n/a
19	TCF7L2	chr7:150065184-150065857	MCF-7	breast:	n/a	chr7:150065520-150065529 chr7:150065517-150065531
20	RCOR1	chr7:150065023-150065959	K562	blood:	n/a	n/a
21	POLR2A	chr7:150064947-150065766	K562	blood:	n/a	n/a
22	POLR2A	chr7:150064985-150066681	PFSK-1	brain:	n/a	n/a
23	CCNT2	chr7:150065062-150066471	K562	blood:	n/a	chr7:150066157-150066166
24	IRF1	chr7:150064441-150066185	K562	blood:	n/a	n/a
25	POLR2A	chr7:150065419-150066782	U87	brain:	n/a	n/a
26	TAF1	chr7:150065505-150066779	SK-N-SH	brain:	n/a	n/a
27	HNF4A	chr7:150065398-150066010	HepG2	liver:	n/a	chr7:150065629-150065644
28	TAL1	chr7:150065050-150066012	K562	blood:	n/a	n/a
29	POLR2A	chr7:150065024-150068774	GM12892	blood:	n/a	n/a
30	E2F6	chr7:150065007-150066133	H1-hESC	embryonic stem cell:	n/a	n/a
31	NR2F2	chr7:150065008-150065995	K562	blood:	n/a	n/a
32	CHD2	chr7:150065067-150066882	GM12878	blood:	n/a	chr7:150066669-150066679
33	NFIC	chr7:150064836-150066016	ECC-1	luminal epithelium:	n/a	chr7:150065263-150065279 chr7:150065263-150065280
34	MYC	chr7:150064768-150067169	A549	lung:	n/a	chr7:150066414-150066424 chr7:150065597-150065604 chr7:150065226-150065233 chr7:150065225-150065234 chr7:150065861-150065870 chr7:150065861-150065870 chr7:150065594-150065604 chr7:150065688-150065697 chr7:150065692-150065701 chr7:150065595-150065604 chr7:150065223-150065232 chr7:150065860-150065871
35	MAX	chr7:150065052-150065969	H1-hESC	embryonic stem cell:	n/a	chr7:150065597-150065604 chr7:150065226-150065233 chr7:150065225-150065234 chr7:150065861-150065870 chr7:150065861-150065870 chr7:150065594-150065604 chr7:150065688-150065697 chr7:150065692-150065701 chr7:150065595-150065604 chr7:150065223-150065232 chr7:150065860-150065871
36	YY1	chr7:150065297-150066392	GM12891	blood:	n/a	chr7:150065456-150065467 chr7:150066370-150066381 chr7:150066184-150066198 chr7:150065460-150065474 chr7:150065431-150065442 chr7:150065431-150065440
37	E2F4	chr7:150065110-150066429	K562	blood:	n/a	n/a
38	NFIC	chr7:150065014-150065749	HepG2	liver:	n/a	chr7:150065263-150065279 chr7:150065263-150065280
39	CTCF	chr7:150065440-150065590	SAEC	small airway:	n/a	n/a
40	TBP	chr7:150065099-150066849	HepG2	liver:	n/a	n/a
41	ELF1	chr7:150065342-150066539	K562	blood:	n/a	n/a
42	NFIC	chr7:150064879-150065614	GM12878	blood:	n/a	chr7:150065263-150065279 chr7:150065263-150065280
43	POLR2A	chr7:150065045-150069575	GM18526	blood:	n/a	n/a
44	TAF1	chr7:150065424-150066348	GM12878	blood:	n/a	n/a
45	ZC3H11A	chr7:150065003-150066052	K562	blood:	n/a	n/a
46	POLR2A	chr7:150065011-150067302	Raji	blood:	n/a	n/a
47	TCF12	chr7:150064843-150067004	A549	lung:	n/a	chr7:150066360-150066370 chr7:150066361-150066368 chr7:150066393-150066401 chr7:150065721-150065731
48	POLR2A	chr7:150065541-150066692	Gliobla	brain:	n/a	n/a
49	BCLAF1	chr7:150065411-150066836	GM12878	blood:	n/a	chr7:150066740-150066749 chr7:150065451-150065464 chr7:150066481-150066490 chr7:150065430-150065439
50	KAP1	chr7:150064912-150065675	U2OS	brain:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:150065534-150065584	HCM	heart:	n/a
2	chr7:150065534-150065584	PrEC	prostate:	n/a
3	chr7:150065534-150065584	GM12878	blood:	n/a
4	chr7:150065534-150065584	PFSK-1	brain:	n/a
5	chr7:150065534-150065584	HEEpiC	esophagus:	n/a
6	chr7:150065534-150065584	AG04450	lung:	fetal
7	chr7:150065534-150065584	SK-N-MC	brain:	n/a
8	chr7:150065534-150065584	T-47D	breast:	n/a
9	chr7:150065534-150065584	HIPEpiC	eye:	n/a
10	chr7:150065534-150065584	ECC-1	luminal epithelium:	n/a
11	chr7:150065534-150065584	HCT-116	colon:	n/a
12	chr7:150065534-150065584	SK-N-SH_RA	brain:	n/a
13	chr7:150065534-150065584	PANC-1	pancreas:	n/a
14	chr7:150065534-150065584	NHBE	bronchial:	n/a
15	chr7:150065534-150065584	HRCEpiC	kidney:	n/a
16	chr7:150065534-150065584	NB4	blood:	n/a
17	chr7:150065534-150065584	Jurkat	blood:	n/a
18	chr7:150065534-150065584	IMR90	lung:	fetal
19	chr7:150065534-150065584	HepG2	liver:	n/a
20	chr7:150065534-150065584	CMK	blood:	n/a
21	chr7:150065534-150065584	H1-hESC	embryonic stem cell:	embryo
22	chr7:150065534-150065584	HMEC	breast:	n/a
23	chr7:150065534-150065584	K562	blood:	n/a
24	chr7:150065534-150065584	RPTEC	kidney:	n/a
25	chr7:150065534-150065584	AG09319	gingival:	n/a
26	chr7:150065534-150065584	U87	brain:	n/a
27	chr7:150065534-150065584	AG10803	skin:	n/a
28	chr7:150065534-150065584	HNPCEpiC	eye:	n/a
29	chr7:150065534-150065584	A549	lung:	n/a
30	chr7:150065534-150065584	HRE	kidney:	n/a
31	chr7:150065534-150065584	AG09309	skin:	n/a
32	chr7:150065534-150065584	HEK293	kidney:	embryo
33	chr7:150065534-150065584	HAEpiC	amniotic membrane:	n/a
34	chr7:150065534-150065584	NH-A	brain:	n/a
35	chr7:150065534-150065584	GM12891	blood:	n/a
36	chr7:150065534-150065584	HPAEpiC	pulmonary alveolar:	n/a
37	chr7:150065534-150065584	Hela-S3	cervix:	n/a
38	chr7:150065534-150065584	ovcar-3	ovarian:	n/a
39	chr7:150065534-150065584	AoSMC	blood vessel:	n/a
40	chr7:150065534-150065584	HCPEpiC	choroid plexus:	n/a
41	chr7:150065534-150065584	GM06990	blood:	n/a
42	chr7:150065534-150065584	GM19239	blood:	n/a
43	chr7:150065534-150065584	HUVEC	blood vessel:	n/a
44	chr7:150065534-150065584	MCF10A-Er-Src	breast:	n/a
45	chr7:150065534-150065584	BE2_C	brain:	n/a
46	chr7:150065534-150065584	MCF-7	breast:	n/a
47	chr7:150065534-150065584	HRPEpiC	eye:	n/a
48	chr7:150065534-150065584	Hepatocyte	liver:	n/a
49	chr7:150065534-150065584	Caco-2	colon:	n/a
50	chr7:150065534-150065584	BJ	skin:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:44354618..44355305-chr7:150065512..150066433,2	NB4	blood:
2	chr7:149570103..149572096-chr7:150064199..150066897,3	MCF-7	breast:
3	chr7:150064606..150067565-chr7:150746513..150748694,2	MCF-7	breast:
4	chr7:150063876..150080670-chr7:150093696..150109118,65	MCF-7	breast:
5	chr7:150034163..150038835-chr7:150063325..150067223,6	MCF-7	breast:
6	chr2:242674047..242674948-chr7:150065363..150065916,2	Hela-S3	cervix:
7	chr17:79791383..79792935-chr7:150064907..150066463,2	MCF-7	breast:
8	chr7:150016171..150021897-chr7:150062899..150068795,19	MCF-7	breast:
9	chr16:2205198..2205821-chr7:150065416..150066310,2	Hela-S3	cervix:
10	chr7:150026896..150029786-chr7:150064895..150066842,2	MCF-7	breast:
11	chr7:150018458..150023402-chr7:150064103..150067772,7	MCF-7	breast:
12	chr7:150017186..150022010-chr7:150063447..150067622,10	K562	blood:
13	chr7:150064404..150066708-chr7:150128401..150130893,2	MCF-7	breast:
14	chr7:150020223..150020755-chr7:150064934..150065818,2	Hela-S3	cervix:
15	chr7:150063752..150069023-chr7:150095376..150104764,21	MCF-7	breast:
16	chr7:150017186..150022141-chr7:150063447..150068849,12	K562	blood:
17	chr7:149570954..149573807-chr7:150065336..150068583,3	MCF-7	breast:
18	chr7:150065484..150068056-chr7:150811875..150813765,2	MCF-7	breast:
19	chr19:39420846..39421801-chr7:150065013..150066008,2	HCT-116	colon:
20	chr17:56736287..56736860-chr7:150065222..150065796,2	MCF-7	breast:
21	chr7:150038539..150040315-chr7:150063994..150067487,3	MCF-7	breast:
22	chr7:150064708..150066870-chr7:150673905..150675576,2	MCF-7	breast:

Variant related genes	Relation type
REPIN1	TF binding region
ZNF775	TF binding region
REPIN1	CpG island
ZNF775	CpG island
ENSG00000215692	Chromatin interaction
ENSG00000242258	Chromatin interaction
ENSG00000188707	Chromatin interaction
ENSG00000204934	Chromatin interaction
ENSG00000055118	Chromatin interaction
ENSG00000106538	Chromatin interaction
ENSG00000180902	Chromatin interaction
ENSG00000171130	Chromatin interaction
ENSG00000261305	Chromatin interaction
ENSG00000128626	Chromatin interaction
ENSG00000202077	Chromatin interaction
ENSG00000182676	Chromatin interaction
ENSG00000096401	Chromatin interaction
ENSG00000131653	Chromatin interaction
ENSG00000196456	Chromatin interaction
ENSG00000104835	Chromatin interaction
ENSG00000106526	Chromatin interaction
ENSG00000127399	Chromatin interaction
ENSG00000260260	Chromatin interaction
ENSG00000133612	Chromatin interaction
ENSG00000213199	Chromatin interaction

Extended variants
information (count: 61 )
Associated
traits (count: 3 )

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10248975	0.87[EUR][1000 genomes]
rs10264443	0.87[EUR][1000 genomes]
rs10271869	0.85[EUR][1000 genomes]
rs10278277	0.87[EUR][1000 genomes]
rs10480297	0.90[ASN][1000 genomes]
rs1051760	0.86[EUR][1000 genomes]
rs1051764	0.86[EUR][1000 genomes]
rs1051823	0.86[EUR][1000 genomes]
rs1132261	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11762223	0.87[ASN][1000 genomes]
rs11768108	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11771677	0.84[EUR][1000 genomes]
rs11771693	0.82[EUR][1000 genomes]
rs11773825	0.87[ASN][1000 genomes]
rs11972067	0.84[EUR][1000 genomes]
rs12703061	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13238964	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13307276	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs17173681	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17173682	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs17173702	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs17173703	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1983441	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2190994	0.82[ASN][1000 genomes]
rs28398138	0.88[EUR][1000 genomes]
rs34311995	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs35435439	0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35635199	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs35840727	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs36069544	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3735165	0.86[EUR][1000 genomes]
rs3735166	0.83[EUR][1000 genomes]
rs3757423	0.86[EUR][1000 genomes]
rs3757424	0.86[EUR][1000 genomes]
rs3757425	0.86[EUR][1000 genomes]
rs57274670	0.84[ASN][1000 genomes]
rs6722	0.86[EUR][1000 genomes]
rs6946097	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6946153	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6956002	0.87[ASN][1000 genomes]
rs71537957	0.84[AMR][1000 genomes];0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1034409	chr7:149844639-150447071	Flanking Active TSS Active TSS Genic enhancers Enhancers ZNF genes & repeats Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv608990	chr7:149961274-150707488	Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	90 gene(s)	inside rSNPs	diseases
3	nsv1015582	chr7:149967986-150285104	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	63 gene(s)	inside rSNPs	diseases
4	nsv889453	chr7:150009838-150104410	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
5	nsv889454	chr7:150009838-150115183	Strong transcription Flanking Active TSS Weak transcription Enhancers Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
6	nsv889455	chr7:150013393-150104410	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
7	nsv889456	chr7:150013393-150115183	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
8	nsv1017368	chr7:150016952-150655773	Bivalent Enhancer ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
9	nsv539195	chr7:150016952-150655773	Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	80 gene(s)	inside rSNPs	diseases
10	nsv889457	chr7:150020295-150104410	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
11	nsv889458	chr7:150020295-150115183	Enhancers Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
12	nsv521407	chr7:150020295-150118590	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
13	nsv465211	chr7:150035526-150104410	Flanking Active TSS Active TSS Enhancers Genic enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
14	nsv608991	chr7:150035526-150104410	Flanking Active TSS Bivalent/Poised TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	44 gene(s)	inside rSNPs	diseases
15	nsv889459	chr7:150041610-150071464	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	29 gene(s)	inside rSNPs	diseases
16	nsv608992	chr7:150045910-150115183	Transcr. at gene 5' and 3' Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases
17	esv1819714	chr7:150055837-150154944	Bivalent/Poised TSS Flanking Active TSS Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
18	nsv889460	chr7:150060163-150079459	Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Genic enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	37 gene(s)	inside rSNPs	diseases
19	nsv889461	chr7:150060163-150081485	Strong transcription Flanking Active TSS Enhancers Weak transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	inside rSNPs	diseases
20	nsv889462	chr7:150060163-150108536	Active TSS Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	42 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs71537958	LRRC61	cis	Muscle Skeletal	GTEx
rs71537958	REPIN1	cis	Muscle Skeletal	GTEx
rs71537958	LRRC61	cis	Skin Sun Exposed Lower leg	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:150064600-150065800	Flanking Active TSS	Primary B cells from cord blood	blood
2	chr7:150064600-150065800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr7:150064600-150067800	Flanking Active TSS	Primary hematopoietic stem cells	blood
4	chr7:150064800-150065600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
5	chr7:150064800-150065600	Flanking Active TSS	K562	blood
6	chr7:150064800-150065600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
7	chr7:150064800-150065800	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
8	chr7:150064800-150066400	Active TSS	Breast Myoepithelial Primary Cells	Breast
9	chr7:150064800-150067600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr7:150065000-150065600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr7:150065000-150065600	Flanking Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr7:150065000-150065600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr7:150065000-150065600	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
14	chr7:150065000-150065600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
15	chr7:150065000-150065600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr7:150065000-150065600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
17	chr7:150065000-150065600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr7:150065000-150065600	Flanking Active TSS	Adipose Nuclei	Adipose
19	chr7:150065000-150065600	Flanking Active TSS	HUVEC	blood vessel
20	chr7:150065000-150065600	Flanking Active TSS	NHEK	skin
21	chr7:150065000-150065600	Flanking Active TSS	NHLF	lung
22	chr7:150065000-150065800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
23	chr7:150065000-150065800	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr7:150065000-150065800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
25	chr7:150065000-150066200	Active TSS	Colonic Mucosa	Colon
26	chr7:150065000-150066400	Active TSS	Liver	Liver
27	chr7:150065000-150066600	Active TSS	iPS-20b Cell Line	embryonic stem cell
28	chr7:150065000-150066600	Active TSS	Brain Angular Gyrus	brain
29	chr7:150065000-150066600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
30	chr7:150065000-150066600	Active TSS	Brain Substantia Nigra	brain
31	chr7:150065000-150066600	Active TSS	Colon Smooth Muscle	Colon
32	chr7:150065000-150066800	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr7:150065000-150066800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr7:150065000-150066800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr7:150065000-150066800	Active TSS	iPS-15b Cell Line	embryonic stem cell
36	chr7:150065000-150066800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
37	chr7:150065000-150066800	Active TSS	Psoas Muscle	Psoas
38	chr7:150065000-150066800	Active TSS	NHDF-Ad	bronchial
39	chr7:150065000-150067000	Active TSS	ES-I3 Cell Line	embryonic stem cell
40	chr7:150065000-150067000	Active TSS	ES-WA7 Cell Line	embryonic stem cell
41	chr7:150065000-150067000	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
42	chr7:150065000-150067000	Active TSS	HSMM	muscle
43	chr7:150065000-150068400	Active TSS	Pancreatic Islets	Pancreatic Islet
44	chr7:150065200-150065600	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr7:150065200-150065600	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr7:150065200-150065600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
47	chr7:150065200-150065600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
48	chr7:150065200-150065600	Flanking Active TSS	Pancreas	Pancrea
49	chr7:150065200-150065600	Active TSS	Right Atrium	heart
50	chr7:150065200-150065800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin

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