Variant report

Variant	rs7156288
Chromosome Location	chr14:84339719-84339720
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10136995	1.00[ASN][1000 genomes]
rs10146565	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1698249	1.00[ASN][1000 genomes]
rs1698251	1.00[ASN][1000 genomes]
rs1705643	1.00[ASN][1000 genomes]
rs1705646	1.00[ASN][1000 genomes]
rs1705649	1.00[ASN][1000 genomes]
rs1705653	1.00[ASN][1000 genomes]
rs1705659	1.00[ASN][1000 genomes]
rs17119210	1.00[ASN][1000 genomes]
rs1756279	1.00[ASN][1000 genomes]
rs28376590	1.00[ASN][1000 genomes]
rs28602388	1.00[ASN][1000 genomes]
rs7150108	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8010850	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431019	chr14:84303525-84365447	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv902159	chr14:84336944-84447356	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84337000-84342400	Enhancers	Fetal Stomach	stomach
2	chr14:84337800-84339800	Weak transcription	Fetal Lung	lung
3	chr14:84338400-84339800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr14:84338400-84340600	Weak transcription	HSMMtube	muscle
5	chr14:84339400-84340000	Enhancers	Ovary	ovary

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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