Variant report

Variant	rs7156725
Chromosome Location	chr14:68192653-68192654
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2)
CpG islands
(count:0)
Chromatin interactive
region (count:5)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr14:68192580-68192730	HEEpiC	esophagus:	n/a	n/a
2	CTCF	chr14:68192600-68192750	HMF	breast:	n/a	n/a

No data

(count:5 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:68190643..68193563-chr14:68204307..68206104,2	K562	blood:
2	chr14:68160495..68162347-chr14:68190470..68192944,2	MCF-7	breast:
3	chr14:68190217..68193194-chr14:68199336..68202073,2	MCF-7	breast:
4	chr14:68190839..68193563-chr14:68203965..68206104,2	K562	blood:
5	chr14:68186603..68190707-chr14:68192396..68197182,7	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1007283	0.93[AFR][1000 genomes]
rs10288	1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs34852231	1.00[EUR][1000 genomes]
rs3742885	1.00[MEX][hapmap]
rs7144587	1.00[EUR][1000 genomes]
rs8017209	1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902068	chr14:68083133-68204876	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
2	nsv1042536	chr14:68136913-68343198	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
3	nsv542122	chr14:68136913-68343198	Strong transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
4	nsv521832	chr14:68141009-68204876	Transcr. at gene 5' and 3' Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68189000-68218800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr14:68189400-68200800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr14:68189600-68195000	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr14:68189600-68196000	Weak transcription	Brain Inferior Temporal Lobe	brain
5	chr14:68189600-68196400	Weak transcription	Brain Anterior Caudate	brain
6	chr14:68189800-68195000	Weak transcription	Liver	Liver
7	chr14:68189800-68213400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr14:68191200-68193400	Enhancers	Esophagus	oesophagus
9	chr14:68192000-68192800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr14:68192000-68194000	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
11	chr14:68192400-68195800	Weak transcription	Pancreas	Pancrea

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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