Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11848998	0.85[GIH][hapmap];1.00[TSI][hapmap]
rs12436858	0.86[JPT][hapmap];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17109172	1.00[TSI][hapmap]
rs17109214	0.87[YRI][hapmap]
rs17109218	1.00[ASW][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.87[YRI][hapmap]
rs17109224	1.00[GIH][hapmap];1.00[TSI][hapmap]
rs56187621	1.00[AMR][1000 genomes]
rs56376412	1.00[AMR][1000 genomes]
rs57309646	1.00[AMR][1000 genomes]
rs6574504	1.00[TSI][hapmap]
rs7144015	1.00[TSI][hapmap]
rs73339468	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs74068628	1.00[AMR][1000 genomes]
rs74068669	1.00[AMR][1000 genomes]
rs74068675	1.00[AMR][1000 genomes]
rs74068676	1.00[AMR][1000 genomes]
rs74068677	1.00[AMR][1000 genomes]
rs74068679	1.00[AMR][1000 genomes]
rs74068693	1.00[AMR][1000 genomes]
rs8005044	1.00[TSI][hapmap]
rs8014580	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931412	chr14:79420297-79928269	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv902110	chr14:79624492-79998294	Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv530072	chr14:79769657-79928269	Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv1045241	chr14:79885361-80734201	Weak transcription Enhancers Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79884200-79901800	Weak transcription	Stomach Smooth Muscle	stomach

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