Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs11848998	1.00[TSI][hapmap]
rs17108966	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs17109013	0.85[AMR][1000 genomes]
rs17109025	1.00[GIH][hapmap];1.00[MEX][hapmap]
rs17109036	1.00[AMR][1000 genomes]
rs17109070	1.00[MEX][hapmap]
rs17109172	1.00[TSI][hapmap]
rs17109218	1.00[TSI][hapmap]
rs17109224	1.00[TSI][hapmap]
rs2122435	1.00[EUR][1000 genomes]
rs2887896	0.89[ASW][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap]
rs2887910	1.00[EUR][1000 genomes]
rs6574503	1.00[EUR][1000 genomes]
rs6574504	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs7150884	1.00[TSI][hapmap]
rs7151352	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs7154580	1.00[TSI][hapmap]
rs7154594	1.00[TSI][hapmap]
rs715697	1.00[EUR][1000 genomes]
rs7158379	1.00[TSI][hapmap]
rs7159606	1.00[MEX][hapmap]
rs7159701	1.00[EUR][1000 genomes]
rs7159960	1.00[MEX][hapmap]
rs7161108	1.00[EUR][1000 genomes]
rs74067999	1.00[EUR][1000 genomes]
rs74069726	1.00[EUR][1000 genomes]
rs74069728	1.00[EUR][1000 genomes]
rs74069736	1.00[EUR][1000 genomes]
rs7494074	0.85[AMR][1000 genomes]
rs8005044	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs8014560	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931412	chr14:79420297-79928269	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv902110	chr14:79624492-79998294	Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv528346	chr14:79683956-79747251	Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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