Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs17109013	0.97[ASN][1000 genomes]
rs17109025	0.97[ASN][1000 genomes]
rs1868636	0.97[ASN][1000 genomes]
rs2122435	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2197994	0.97[ASN][1000 genomes]
rs2218785	0.97[ASN][1000 genomes]
rs2887910	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6574503	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6574504	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7153825	0.97[ASN][1000 genomes]
rs7153826	0.97[ASN][1000 genomes]
rs715697	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7159701	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7159954	0.97[ASN][1000 genomes]
rs7161108	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7161402	0.97[ASN][1000 genomes]
rs74067962	0.97[ASN][1000 genomes]
rs74067963	0.97[ASN][1000 genomes]
rs74067965	0.97[ASN][1000 genomes]
rs74067967	0.97[ASN][1000 genomes]
rs74067968	0.97[ASN][1000 genomes]
rs74067999	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74069727	0.83[AFR][1000 genomes]
rs74069728	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74069736	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7494074	0.97[ASN][1000 genomes]
rs8005044	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8005937	0.97[ASN][1000 genomes]
rs8005957	0.97[ASN][1000 genomes]
rs8007640	0.97[ASN][1000 genomes]
rs8014560	1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv931412	chr14:79420297-79928269	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv902110	chr14:79624492-79998294	Bivalent/Poised TSS Enhancers Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv530072	chr14:79769657-79928269	Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79773400-79791600	Weak transcription	Stomach Smooth Muscle	stomach
2	chr14:79781400-79784600	Weak transcription	Colon Smooth Muscle	Colon
3	chr14:79782800-79798400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr14:79783400-79785000	Enhancers	HUVEC	blood vessel
5	chr14:79784000-79784800	Enhancers	Placenta Amnion	Placenta Amnion
6	chr14:79784400-79784600	Enhancers	Muscle Satellite Cultured Cells	--
7	chr14:79784400-79785000	Enhancers	HSMMtube	muscle

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