Variant report

Variant	rs7160960
Chromosome Location	chr14:81780093-81780094
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:81685596..81687723-chr14:81779481..81781884,2	MCF-7	breast:
2	chr14:81686550..81688217-chr14:81779859..81782471,2	K562	blood:
3	chr14:81779689..81782584-chr14:81913814..81916244,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000165417	Chromatin interaction

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs61978889	1.00[AMR][1000 genomes]
rs61978890	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs61978891	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61978897	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61978912	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs61978914	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:58 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81769400-81781000	Weak transcription	Psoas Muscle	Psoas
2	chr14:81771000-81785400	Weak transcription	Fetal Intestine Large	intestine
3	chr14:81771800-81785200	Weak transcription	Fetal Intestine Small	intestine
4	chr14:81773600-81790600	Weak transcription	K562	blood
5	chr14:81775600-81783000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr14:81776000-81783000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr14:81777200-81781400	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr14:81777200-81781600	Enhancers	HUES64 Cell Line	embryonic stem cell
9	chr14:81777200-81783000	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr14:81777200-81784000	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr14:81777200-81784200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr14:81777400-81781200	Enhancers	iPS-18 Cell Line	embryonic stem cell
13	chr14:81777400-81783000	Enhancers	H1 Cell Line	embryonic stem cell
14	chr14:81777600-81781400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr14:81777600-81782800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr14:81777800-81780400	Weak transcription	Fetal Muscle Trunk	muscle
17	chr14:81778000-81781400	Enhancers	Fetal Brain Female	brain
18	chr14:81778200-81780800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
19	chr14:81778200-81782200	Enhancers	Fetal Brain Male	brain
20	chr14:81778400-81780200	Weak transcription	Skeletal Muscle Male	skeletal muscle
21	chr14:81778400-81781000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr14:81778400-81810800	Weak transcription	Primary hematopoietic stem cells	blood
23	chr14:81778600-81780200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr14:81778600-81780200	Weak transcription	Pancreas	Pancrea
25	chr14:81778600-81780800	Weak transcription	Skeletal Muscle Female	skeletal muscle
26	chr14:81778600-81781200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
27	chr14:81778600-81782600	Weak transcription	Fetal Lung	lung
28	chr14:81778600-81783000	Enhancers	HUES6 Cell Line	embryonic stem cell
29	chr14:81778600-81786000	Weak transcription	Stomach Mucosa	stomach
30	chr14:81778600-81786400	Weak transcription	Adipose Nuclei	Adipose
31	chr14:81778600-81789200	Weak transcription	Esophagus	oesophagus
32	chr14:81778800-81780200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr14:81778800-81780400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr14:81778800-81780400	Weak transcription	Cortex derived primary cultured neurospheres	brain
35	chr14:81778800-81780800	Weak transcription	Fetal Muscle Leg	muscle
36	chr14:81778800-81781200	Weak transcription	Spleen	Spleen
37	chr14:81779000-81780200	Weak transcription	Rectal Mucosa Donor 31	rectum
38	chr14:81779000-81780800	Weak transcription	Fetal Kidney	kidney
39	chr14:81779000-81781000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr14:81779000-81782800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
41	chr14:81779200-81780200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
42	chr14:81779200-81780200	Weak transcription	Primary monocytes fromperipheralblood	blood
43	chr14:81779200-81780800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr14:81779400-81780400	Weak transcription	Brain Hippocampus Middle	brain
45	chr14:81779400-81780800	Weak transcription	H9 Cell Line	embryonic stem cell
46	chr14:81779400-81781400	Weak transcription	Brain Anterior Caudate	brain
47	chr14:81779400-81781800	Weak transcription	Placenta	Placenta
48	chr14:81779600-81780200	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr14:81779600-81780800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
50	chr14:81779600-81782800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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