Variant report

Variant	rs7161343
Chromosome Location	chr14:78760484-78760485
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs11159346	0.89[CEU][hapmap];0.81[JPT][hapmap];0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12435398	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.90[JPT][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap];0.88[YRI][hapmap];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34948474	0.81[EUR][1000 genomes]
rs35207326	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7144451	0.95[CEU][hapmap];0.88[CHB][hapmap];0.81[JPT][hapmap];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7144894	0.94[CEU][hapmap];0.88[CHB][hapmap];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs8008276	0.93[CEU][hapmap];0.81[EUR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78731000-78764200	Weak transcription	Brain Cingulate Gyrus	brain
2	chr14:78738600-78778200	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr14:78738600-78779000	Weak transcription	Brain Angular Gyrus	brain
4	chr14:78749400-78764000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr14:78750200-78778400	Weak transcription	Brain Anterior Caudate	brain
6	chr14:78753000-78764200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr14:78757600-78764200	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr14:78758000-78763800	Weak transcription	Fetal Brain Male	brain
9	chr14:78758400-78763200	Weak transcription	Brain Germinal Matrix	brain
10	chr14:78758600-78764200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr14:78758800-78761000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr14:78758800-78764200	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr14:78758800-78764400	Weak transcription	HUES64 Cell Line	embryonic stem cell
14	chr14:78758800-78768800	Weak transcription	H9 Cell Line	embryonic stem cell
15	chr14:78759200-78764200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr14:78759200-78764400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr14:78759800-78764000	Weak transcription	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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