Variant report

Variant	rs8008276
Chromosome Location	chr14:78746995-78746996
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11159346	0.93[CEU][hapmap];0.81[JPT][hapmap];0.91[YRI][hapmap];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12435398	0.93[CEU][hapmap];0.80[EUR][1000 genomes]
rs12894554	0.93[ASN][1000 genomes]
rs17754986	0.80[YRI][hapmap]
rs17828054	0.80[YRI][hapmap]
rs34948474	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs35207326	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7144451	1.00[CEU][hapmap];0.83[YRI][hapmap];0.88[EUR][1000 genomes]
rs7144894	1.00[CEU][hapmap];0.83[YRI][hapmap];0.90[EUR][1000 genomes]
rs7161343	0.93[CEU][hapmap];0.81[EUR][1000 genomes]
rs8008429	0.83[YRI][hapmap]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78731000-78764200	Weak transcription	Brain Cingulate Gyrus	brain
2	chr14:78731400-78748200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr14:78738600-78778200	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr14:78738600-78779000	Weak transcription	Brain Angular Gyrus	brain
5	chr14:78745000-78757800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr14:78745200-78751800	Weak transcription	Brain Germinal Matrix	brain
7	chr14:78746200-78747800	Weak transcription	Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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