Variant report

Variant	rs7179085
Chromosome Location	chr15:74169947-74169948
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11634862	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12708512	0.94[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs4324082	0.89[AMR][1000 genomes]
rs4332700	0.89[AMR][1000 genomes]
rs7171668	0.89[AMR][1000 genomes]
rs744617	0.81[YRI][hapmap]
rs8035434	0.89[AMR][1000 genomes]
rs8037504	0.89[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043335	chr15:74078689-74241186	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:74168400-74170200	Weak transcription	Fetal Intestine Small	intestine
2	chr15:74169200-74174200	Weak transcription	Fetal Intestine Large	intestine
3	chr15:74169600-74170000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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