Variant report

Variant rs7180408
Chromosome Location chr15:59948461-59948462
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:59925600-59948600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr15:59927200-59948800 Weak transcription Aorta Aorta
3 chr15:59938200-59948800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr15:59938600-59949200 Weak transcription Lung lung
5 chr15:59941000-59949200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr15:59945600-59948800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr15:59946000-59948800 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr15:59946200-59948600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr15:59946600-59948600 Weak transcription Fetal Intestine Large intestine
10 chr15:59946600-59948600 Weak transcription Fetal Muscle Trunk muscle
11 chr15:59946800-59949000 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr15:59947000-59948600 Enhancers Primary T helper cells fromperipheralblood blood
13 chr15:59947000-59948800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr15:59947000-59948800 Enhancers Small Intestine intestine
15 chr15:59947200-59948800 Enhancers Primary monocytes fromperipheralblood blood
16 chr15:59947200-59948800 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr15:59947200-59948800 Enhancers Skeletal Muscle Male skeletal muscle
18 chr15:59947200-59949000 Enhancers Primary mononuclear cells fromperipheralblood Blood
19 chr15:59947400-59948600 Flanking Active TSS GM12878-XiMat blood
20 chr15:59947400-59948800 Enhancers Primary hematopoietic stem cells blood
21 chr15:59947400-59948800 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr15:59947400-59949000 Enhancers Stomach Mucosa stomach
23 chr15:59947600-59948600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
24 chr15:59947600-59948600 Enhancers Adipose Nuclei Adipose
25 chr15:59947600-59948600 Enhancers Brain Germinal Matrix brain
26 chr15:59947600-59948600 Enhancers Brain Substantia Nigra brain
27 chr15:59947600-59948600 Enhancers Ovary ovary
28 chr15:59947600-59948600 Enhancers Right Ventricle heart
29 chr15:59947600-59948600 Enhancers Spleen Spleen
30 chr15:59947600-59948800 Enhancers Primary B cells from peripheral blood blood
31 chr15:59947600-59948800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
32 chr15:59947600-59948800 Enhancers Primary T killer memory cells from peripheral blood blood
33 chr15:59947600-59948800 Enhancers Sigmoid Colon Sigmoid Colon
34 chr15:59947600-59948800 Flanking Active TSS A549 lung
35 chr15:59947600-59949000 Enhancers Primary neutrophils fromperipheralblood blood
36 chr15:59947600-59949000 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
37 chr15:59947600-59949000 Enhancers Fetal Heart heart
38 chr15:59947600-59950000 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
39 chr15:59947600-59950200 Active TSS HUES6 Cell Line embryonic stem cell
40 chr15:59947600-59950200 Active TSS HUES64 Cell Line embryonic stem cell
41 chr15:59947600-59950400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr15:59947800-59948600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr15:59947800-59948600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr15:59947800-59948600 Enhancers Primary T helper naive cells from peripheral blood blood
45 chr15:59947800-59948600 Enhancers Colon Smooth Muscle Colon
46 chr15:59947800-59948800 Enhancers Placenta Placenta
47 chr15:59947800-59949000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
48 chr15:59947800-59949000 Flanking Active TSS Dnd41 blood
49 chr15:59947800-59949000 Flanking Active TSS Hela-S3 cervix
50 chr15:59947800-59949200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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