Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10763044	0.96[CEU][hapmap];0.83[MEX][hapmap]
rs10763052	0.96[CEU][hapmap];0.83[MEX][hapmap]
rs10763053	0.92[CEU][hapmap];0.83[MEX][hapmap]
rs10763054	0.92[CEU][hapmap]
rs10763057	0.92[CEU][hapmap]
rs10763064	0.82[CEU][hapmap]
rs10825191	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10825194	0.92[CEU][hapmap]
rs10825195	0.95[CEU][hapmap]
rs10825207	0.81[CEU][hapmap]
rs10825211	0.82[CEU][hapmap]
rs11004025	0.82[CEU][hapmap]
rs1911381	0.82[CEU][hapmap]
rs1911382	0.82[CEU][hapmap]
rs1911383	0.82[CEU][hapmap]
rs1911384	0.82[CEU][hapmap]
rs2135716	0.82[CEU][hapmap]
rs2610862	0.82[CHB][hapmap]
rs2660161	0.80[CHB][hapmap];0.80[JPT][hapmap]
rs4418714	0.82[CEU][hapmap]
rs4418715	0.82[CEU][hapmap]
rs4615929	0.82[CEU][hapmap]
rs4935495	0.82[CEU][hapmap]
rs7076822	0.82[CEU][hapmap]
rs7082950	0.92[CEU][hapmap]
rs7912972	0.92[CEU][hapmap];0.83[MEX][hapmap]
rs9645506	0.96[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949692	chr10:55502542-55893206	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv869303	chr10:55714219-55857931	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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