Variant report

Variant rs7183480
Chromosome Location chr15:99649246-99649247
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:99645000-99649600 Active TSS Rectal Smooth Muscle rectum
2 chr15:99646400-99663200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
3 chr15:99646600-99653800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr15:99646600-99662200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr15:99646800-99663600 Weak transcription Ovary ovary
6 chr15:99646800-99663600 Weak transcription Spleen Spleen
7 chr15:99647000-99649800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr15:99647000-99662000 Weak transcription HUVEC blood vessel
9 chr15:99647000-99663200 Weak transcription HSMM muscle
10 chr15:99647200-99654000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr15:99647400-99649800 Enhancers Fetal Heart heart
12 chr15:99647600-99649800 Transcr. at gene 5' and 3' Breast Myoepithelial Primary Cells Breast
13 chr15:99647600-99654600 Weak transcription Stomach Mucosa stomach
14 chr15:99647600-99672400 Weak transcription Esophagus oesophagus
15 chr15:99647800-99649400 Weak transcription Brain Inferior Temporal Lobe brain
16 chr15:99647800-99649800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr15:99647800-99653800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr15:99647800-99654800 Weak transcription Placenta Placenta
19 chr15:99648000-99649600 Weak transcription Colonic Mucosa Colon
20 chr15:99648000-99650000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr15:99648000-99650000 Genic enhancers A549 lung
22 chr15:99648000-99650200 Genic enhancers Fetal Stomach stomach
23 chr15:99648000-99650400 Weak transcription Liver Liver
24 chr15:99648000-99651200 Active TSS Duodenum Smooth Muscle Duodenum
25 chr15:99648000-99653800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr15:99648000-99653800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr15:99648000-99653800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr15:99648000-99653800 Weak transcription Pancreas Pancrea
29 chr15:99648000-99658000 Weak transcription Fetal Brain Female brain
30 chr15:99648000-99663200 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr15:99648200-99649400 Weak transcription HMEC breast
32 chr15:99648200-99649800 Enhancers Left Ventricle heart
33 chr15:99648200-99649800 Weak transcription Lung lung
34 chr15:99648200-99650000 Weak transcription Right Atrium heart
35 chr15:99648200-99650600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr15:99648200-99650600 Weak transcription Osteobl bone
37 chr15:99648200-99651000 Weak transcription Thymus Thymus
38 chr15:99648200-99651200 Enhancers Adipose Nuclei Adipose
39 chr15:99648200-99654000 Weak transcription Fetal Intestine Small intestine
40 chr15:99648200-99654000 Weak transcription NHLF lung
41 chr15:99648200-99656200 Weak transcription Hela-S3 cervix
42 chr15:99648200-99663000 Weak transcription NHDF-Ad bronchial
43 chr15:99648200-99663200 Weak transcription Duodenum Mucosa Duodenum
44 chr15:99648400-99651800 Enhancers Aorta Aorta
45 chr15:99648400-99652200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
46 chr15:99648400-99652600 Transcr. at gene 5' and 3' Colon Smooth Muscle Colon
47 chr15:99648600-99650600 Genic enhancers Cortex derived primary cultured neurospheres brain
48 chr15:99648600-99651200 Enhancers GM12878-XiMat blood
49 chr15:99648600-99653600 Weak transcription Brain Hippocampus Middle brain
50 chr15:99648600-99655400 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach

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