Variant report

Variant	rs7189909
Chromosome Location	chr16:73232671-73232672
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs13330336	1.00[AMR][1000 genomes]
rs13332183	1.00[AMR][1000 genomes]
rs28594767	1.00[AMR][1000 genomes]
rs59902979	1.00[AMR][1000 genomes]
rs74028076	1.00[AMR][1000 genomes]
rs74028077	1.00[AMR][1000 genomes]
rs74028078	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869180	chr16:73189128-73726612	Weak transcription Enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:73227000-73235400	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr16:73231400-73236000	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr16:73232400-73232800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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