The 2.0 version of rSNPBase

Variant report

Variant rs72213123
Chromosome Location chr10:97138493-97138494
allele -/GT
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97070400-97139600 Weak transcription Fetal Brain Male brain
2 chr10:97107200-97151800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr10:97109000-97148000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr10:97116400-97139600 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr10:97116400-97142400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr10:97116600-97139400 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr10:97116800-97141400 Weak transcription Fetal Lung lung
8 chr10:97117400-97139200 Weak transcription Brain Germinal Matrix brain
9 chr10:97120400-97141400 Weak transcription Gastric stomach
10 chr10:97121000-97148000 Weak transcription Esophagus oesophagus
11 chr10:97122000-97149400 Weak transcription Spleen Spleen
12 chr10:97126200-97139400 Weak transcription Lung lung
13 chr10:97130200-97141600 Weak transcription Fetal Intestine Small intestine
14 chr10:97130200-97156600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr10:97131200-97140200 Weak transcription H9 Cell Line embryonic stem cell
16 chr10:97131200-97140200 Weak transcription HSMM muscle
17 chr10:97131600-97139800 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr10:97131800-97140200 Weak transcription H1 Cell Line embryonic stem cell
19 chr10:97132000-97139200 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr10:97132000-97139200 Weak transcription Fetal Intestine Large intestine
21 chr10:97133000-97142400 Genic enhancers Adipose Nuclei Adipose
22 chr10:97135200-97138600 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr10:97135600-97139000 Weak transcription Brain Inferior Temporal Lobe brain
24 chr10:97135600-97139400 Weak transcription iPS-20b Cell Line embryonic stem cell
25 chr10:97135600-97139800 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr10:97135600-97155600 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr10:97135800-97141600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr10:97135800-97145000 Strong transcription Fetal Brain Female brain
29 chr10:97136000-97141200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr10:97136200-97139200 Weak transcription Brain Angular Gyrus brain
31 chr10:97136200-97145400 Strong transcription Placenta Placenta
32 chr10:97136400-97139600 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr10:97137000-97140400 Genic enhancers Colon Smooth Muscle Colon
34 chr10:97137200-97139200 Enhancers Aorta Aorta
35 chr10:97137200-97140800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr10:97137200-97147400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr10:97137200-97148000 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr10:97137400-97138800 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr10:97137400-97138800 Enhancers Duodenum Smooth Muscle Duodenum
40 chr10:97137400-97139600 Weak transcription Duodenum Mucosa Duodenum
41 chr10:97137600-97145000 Strong transcription Fetal Muscle Leg muscle
42 chr10:97137800-97138600 Genic enhancers Fetal Stomach stomach
43 chr10:97137800-97139800 Genic enhancers Left Ventricle heart
44 chr10:97137800-97140400 Strong transcription Pancreas Pancrea
45 chr10:97137800-97140400 Genic enhancers Rectal Smooth Muscle rectum
46 chr10:97137800-97142200 Strong transcription HSMMtube muscle
47 chr10:97137800-97144000 Strong transcription Psoas Muscle Psoas
48 chr10:97137800-97144200 Strong transcription HUES48 Cell Line embryonic stem cell
49 chr10:97137800-97146200 Weak transcription Small Intestine intestine
50 chr10:97137800-97147400 Strong transcription HepG2 liver

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Last update: Aug 31, 2015