Variant report

Variant	rs7243611
Chromosome Location	chr18:45304875-45304876
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs16960405	0.92[ASN][1000 genomes]
rs16960407	0.92[ASN][1000 genomes]
rs60081995	0.92[ASN][1000 genomes]
rs60483057	1.00[ASN][1000 genomes]
rs7229826	1.00[CHB][hapmap];0.93[ASN][1000 genomes]
rs7242791	0.84[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs73953301	0.92[ASN][1000 genomes]
rs8083742	0.92[ASN][1000 genomes]
rs9946613	0.80[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3425854	chr18:45188942-45336590	Enhancers Bivalent/Poised TSS Bivalent Enhancer Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:45299600-45306800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr18:45304600-45309600	Enhancers	Placenta	Placenta

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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