Variant report

Variant rs7243734
Chromosome Location chr18:45563098-45563099
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:45550400-45563400 Weak transcription Stomach Mucosa stomach
2 chr18:45550600-45564000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr18:45552600-45565200 Weak transcription Colonic Mucosa Colon
4 chr18:45554200-45563400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr18:45554200-45567800 Weak transcription Brain Cingulate Gyrus brain
6 chr18:45554400-45567600 Weak transcription Rectal Smooth Muscle rectum
7 chr18:45554800-45563400 Weak transcription Stomach Smooth Muscle stomach
8 chr18:45555000-45563800 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr18:45555000-45564000 Weak transcription Adipose Nuclei Adipose
10 chr18:45557400-45570000 Weak transcription Fetal Intestine Small intestine
11 chr18:45558200-45563800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr18:45558400-45578400 Weak transcription Ovary ovary
13 chr18:45559000-45565600 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr18:45559200-45564400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr18:45559800-45565200 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr18:45560200-45563800 Enhancers Spleen Spleen
17 chr18:45560200-45564800 Enhancers Fetal Muscle Leg muscle
18 chr18:45560200-45566400 Genic enhancers Esophagus oesophagus
19 chr18:45560400-45564600 Enhancers Fetal Muscle Trunk muscle
20 chr18:45561600-45563800 Strong transcription Sigmoid Colon Sigmoid Colon
21 chr18:45562400-45564400 Enhancers HSMMtube muscle
22 chr18:45562400-45565200 Enhancers Lung lung
23 chr18:45562600-45563200 Enhancers Fetal Stomach stomach
24 chr18:45562600-45564200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr18:45562600-45564400 Enhancers HMEC breast
26 chr18:45562600-45564800 Enhancers Placenta Placenta
27 chr18:45562600-45566800 Weak transcription Aorta Aorta
28 chr18:45562800-45563200 Bivalent Enhancer Muscle Satellite Cultured Cells --
29 chr18:45562800-45563600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr18:45562800-45564400 Weak transcription Gastric stomach
31 chr18:45562800-45565000 Enhancers Fetal Kidney kidney
32 chr18:45562800-45565200 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr18:45563000-45563200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr18:45563000-45563400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr18:45563000-45563400 Flanking Active TSS Hela-S3 cervix
36 chr18:45563000-45563800 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
37 chr18:45563000-45563800 Enhancers HSMM muscle
38 chr18:45563000-45564000 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr18:45563000-45564200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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