Variant report

Variant rs4940197
Chromosome Location chr18:45558547-45558548
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:45550400-45563400 Weak transcription Stomach Mucosa stomach
2 chr18:45550600-45564000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr18:45550800-45559600 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr18:45550800-45560200 Weak transcription Gastric stomach
5 chr18:45550800-45563000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr18:45551200-45561600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr18:45552600-45565200 Weak transcription Colonic Mucosa Colon
8 chr18:45554200-45559600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr18:45554200-45559600 Weak transcription Osteobl bone
10 chr18:45554200-45563400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr18:45554200-45567800 Weak transcription Brain Cingulate Gyrus brain
12 chr18:45554400-45559600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr18:45554400-45560200 Weak transcription Lung lung
14 chr18:45554400-45562200 Weak transcription Fetal Kidney kidney
15 chr18:45554400-45563000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr18:45554400-45567600 Weak transcription Rectal Smooth Muscle rectum
17 chr18:45554600-45559200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr18:45554600-45560000 Weak transcription Placenta Placenta
19 chr18:45554600-45560800 Weak transcription Brain Substantia Nigra brain
20 chr18:45554800-45560200 Weak transcription Fetal Stomach stomach
21 chr18:45554800-45563400 Weak transcription Stomach Smooth Muscle stomach
22 chr18:45555000-45563800 Weak transcription Skeletal Muscle Female skeletal muscle
23 chr18:45555000-45564000 Weak transcription Adipose Nuclei Adipose
24 chr18:45555200-45559400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr18:45555400-45559600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr18:45555400-45559600 Weak transcription NHEK skin
27 chr18:45555400-45562200 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr18:45555600-45559600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr18:45555800-45559200 Weak transcription HMEC breast
30 chr18:45555800-45559800 Weak transcription Hela-S3 cervix
31 chr18:45556200-45562600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr18:45557400-45570000 Weak transcription Fetal Intestine Small intestine
33 chr18:45557600-45558600 Enhancers Fetal Adrenal Gland Adrenal Gland
34 chr18:45557800-45560400 Weak transcription Fetal Muscle Trunk muscle
35 chr18:45558200-45559400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr18:45558200-45559800 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr18:45558200-45562800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr18:45558200-45563800 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr18:45558400-45560200 Weak transcription Esophagus oesophagus
40 chr18:45558400-45560200 Weak transcription Fetal Muscle Leg muscle
41 chr18:45558400-45560200 Weak transcription Spleen Spleen
42 chr18:45558400-45578400 Weak transcription Ovary ovary

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