The 2.0 version of rSNPBase

Variant report

Variant rs72472323
Chromosome Location chr1:220975729-220975730
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220961000-220976800 Weak transcription Ovary ovary
2 chr1:220961000-220978200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:220961000-220982200 Weak transcription Brain Substantia Nigra brain
4 chr1:220961400-220983800 Weak transcription Esophagus oesophagus
5 chr1:220961600-220983600 Weak transcription Pancreas Pancrea
6 chr1:220961800-220979800 Weak transcription Right Atrium heart
7 chr1:220961800-220981400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr1:220961800-220981600 Weak transcription Fetal Muscle Trunk muscle
9 chr1:220961800-220983800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr1:220964800-220978400 Weak transcription Primary B cells from cord blood blood
11 chr1:220965000-220980000 Weak transcription Fetal Muscle Leg muscle
12 chr1:220965200-220979600 Weak transcription Gastric stomach
13 chr1:220965200-220985400 Weak transcription Aorta Aorta
14 chr1:220965400-220982200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr1:220965600-220983600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:220965800-220983800 Weak transcription Fetal Lung lung
17 chr1:220966400-220996000 Strong transcription Monocytes-CD14+_RO01746 blood
18 chr1:220966600-220982400 Strong transcription Primary monocytes fromperipheralblood blood
19 chr1:220966800-220985200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr1:220967600-220976400 Strong transcription Adipose Nuclei Adipose
21 chr1:220967600-220983800 Weak transcription Psoas Muscle Psoas
22 chr1:220968200-220977200 Strong transcription Primary neutrophils fromperipheralblood blood
23 chr1:220969600-220978800 Strong transcription HepG2 liver
24 chr1:220969800-220976400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr1:220969800-220976600 Strong transcription iPS-20b Cell Line embryonic stem cell
26 chr1:220970000-220976000 Strong transcription Fetal Stomach stomach
27 chr1:220970400-220981600 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr1:220970400-220985800 Weak transcription Duodenum Mucosa Duodenum
29 chr1:220970600-220976400 Strong transcription Fetal Brain Female brain
30 chr1:220970800-220981600 Weak transcription Brain Hippocampus Middle brain
31 chr1:220971000-220976400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:220971200-220976400 Strong transcription Spleen Spleen
33 chr1:220971200-220986400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr1:220971200-220991400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr1:220971600-220976200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:220971600-220980600 Strong transcription Fetal Intestine Small intestine
37 chr1:220972000-220976000 Strong transcription Cortex derived primary cultured neurospheres brain
38 chr1:220972200-220976800 Weak transcription Hela-S3 cervix
39 chr1:220972200-220983800 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr1:220972200-220984000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:220972800-220977800 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr1:220972800-220987600 Weak transcription Fetal Brain Male brain
43 chr1:220973000-220975800 Strong transcription Lung lung
44 chr1:220973200-220979800 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr1:220973200-220981800 Weak transcription Left Ventricle heart
46 chr1:220973200-220983800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:220973200-220991800 Weak transcription Brain Anterior Caudate brain
48 chr1:220973400-221000200 Weak transcription Placenta Placenta
49 chr1:220973600-220983800 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr1:220973800-220977200 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015