The 2.0 version of rSNPBase

Variant report

Variant rs7247540
Chromosome Location chr19:18584478-18584479
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:18571800-18589600 Weak transcription HUVEC blood vessel
2 chr19:18572200-18589600 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr19:18572600-18592400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr19:18575400-18607200 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr19:18575600-18587000 Weak transcription Primary B cells from cord blood blood
6 chr19:18575800-18585000 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr19:18575800-18590800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr19:18576200-18590800 Weak transcription Aorta Aorta
9 chr19:18576400-18586400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr19:18576400-18589600 Weak transcription Placenta Amnion Placenta Amnion
11 chr19:18576600-18586400 Weak transcription Brain Germinal Matrix brain
12 chr19:18576800-18586600 Weak transcription Fetal Lung lung
13 chr19:18576800-18587600 Weak transcription Primary hematopoietic stem cells blood
14 chr19:18576800-18591000 Weak transcription Fetal Brain Female brain
15 chr19:18578400-18589000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr19:18578400-18589400 Weak transcription NH-A brain
17 chr19:18579800-18585000 Strong transcription Primary T cells from cord blood blood
18 chr19:18579800-18585000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr19:18580000-18588800 Weak transcription HMEC breast
20 chr19:18581000-18589800 Weak transcription Rectal Smooth Muscle rectum
21 chr19:18581200-18584800 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr19:18581200-18586600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr19:18581400-18584800 Weak transcription Psoas Muscle Psoas
24 chr19:18581400-18584800 Weak transcription Right Atrium heart
25 chr19:18581400-18586200 Strong transcription Fetal Intestine Small intestine
26 chr19:18581400-18595600 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr19:18581600-18584600 Weak transcription Brain Angular Gyrus brain
28 chr19:18581600-18584600 Weak transcription Brain Hippocampus Middle brain
29 chr19:18581600-18588000 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr19:18581600-18597000 Weak transcription ES-I3 Cell Line embryonic stem cell
31 chr19:18581800-18584800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr19:18581800-18585400 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr19:18581800-18588200 Weak transcription H1 Cell Line embryonic stem cell
34 chr19:18581800-18588200 Weak transcription Hela-S3 cervix
35 chr19:18581800-18589400 Weak transcription NHLF lung
36 chr19:18581800-18589600 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr19:18581800-18590000 Weak transcription Dnd41 blood
38 chr19:18582000-18586000 Weak transcription NHEK skin
39 chr19:18582000-18587600 Weak transcription K562 blood
40 chr19:18582000-18589200 Weak transcription Muscle Satellite Cultured Cells --
41 chr19:18582400-18589600 Weak transcription Thymus Thymus
42 chr19:18583200-18584600 Genic enhancers Skeletal Muscle Female skeletal muscle
43 chr19:18583200-18585600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr19:18583200-18585600 Genic enhancers Lung lung
45 chr19:18583200-18586600 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
46 chr19:18583400-18584600 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
47 chr19:18583400-18585000 Enhancers Skeletal Muscle Male skeletal muscle
48 chr19:18583400-18585600 Genic enhancers Fetal Adrenal Gland Adrenal Gland
49 chr19:18583400-18589600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr19:18583400-18592400 Enhancers Primary Natural Killer cells fromperipheralblood blood

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Last update: Aug 31, 2015