Variant report

Variant	rs72477736
Chromosome Location	chr11:76150861-76150862
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76142850..76144735-chr11:76148116..76151075,2	K562	blood:
2	chr11:76079133..76082087-chr11:76150149..76152952,2	K562	blood:

Variant related genes	Relation type
ENSG00000137492	Chromatin interaction

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11236727	1.00[EUR][1000 genomes]
rs11236743	0.83[ASN][1000 genomes]
rs11236744	1.00[EUR][1000 genomes]
rs17134803	1.00[EUR][1000 genomes]
rs4472961	1.00[EUR][1000 genomes]
rs736983	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2760197	chr11:76143019-76153868	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1050713	chr11:76147085-76267117	Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Enhancers Active TSS Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	45 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76144000-76154000	Weak transcription	Left Ventricle	heart
2	chr11:76145600-76153600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr11:76146000-76152400	Weak transcription	Fetal Intestine Small	intestine
4	chr11:76147600-76154400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr11:76148000-76154400	Weak transcription	HSMM	muscle
6	chr11:76148200-76154600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr11:76148600-76151000	Weak transcription	K562	blood
8	chr11:76148600-76152800	Weak transcription	Fetal Heart	heart
9	chr11:76148600-76154000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
10	chr11:76148600-76154200	Weak transcription	Stomach Smooth Muscle	stomach
11	chr11:76148600-76154400	Weak transcription	Right Ventricle	heart
12	chr11:76149200-76154400	Weak transcription	Spleen	Spleen
13	chr11:76149600-76152800	Weak transcription	HUES6 Cell Line	embryonic stem cell
14	chr11:76149600-76153600	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr11:76149600-76153800	Weak transcription	Cortex derived primary cultured neurospheres	brain
16	chr11:76149600-76154000	Weak transcription	Fetal Thymus	thymus
17	chr11:76150000-76154200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr11:76150000-76154400	Weak transcription	Fetal Muscle Leg	muscle
19	chr11:76150200-76152600	Weak transcription	NHEK	skin
20	chr11:76150400-76153200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
21	chr11:76150600-76152600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
22	chr11:76150800-76151000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
23	chr11:76150800-76153400	Weak transcription	HepG2	liver
24	chr11:76150800-76153800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr11:76150800-76153800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr11:76150800-76154400	Weak transcription	Fetal Kidney	kidney

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