The 2.0 version of rSNPBase

Variant report

Variant rs72480246
Chromosome Location chr1:158968153-158968154
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:28 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:158954400-158968400 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:158955000-158968200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:158960800-158975400 Weak transcription Spleen Spleen
4 chr1:158961000-158968200 Weak transcription Primary B cells from cord blood blood
5 chr1:158963000-158968200 Weak transcription Primary T cells from cord blood blood
6 chr1:158965000-158968200 Weak transcription Fetal Kidney kidney
7 chr1:158965400-158968800 Enhancers Primary T helper cells fromperipheralblood blood
8 chr1:158965600-158969000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
9 chr1:158965600-158969000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr1:158965800-158968200 Enhancers Primary T helper naive cells from peripheral blood blood
11 chr1:158965800-158968600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:158966600-158968600 Enhancers Primary T regulatory cells fromperipheralblood blood
13 chr1:158966800-158968200 Enhancers Primary T helper 17 cells PMA-I stimulated --
14 chr1:158966800-158968400 Weak transcription Primary T cells fromperipheralblood blood
15 chr1:158967000-158968200 Weak transcription Brain Anterior Caudate brain
16 chr1:158967000-158968200 Weak transcription Brain Inferior Temporal Lobe brain
17 chr1:158967000-158968400 Enhancers GM12878-XiMat blood
18 chr1:158967200-158968200 Weak transcription Brain Cingulate Gyrus brain
19 chr1:158967200-158968200 Weak transcription Brain Hippocampus Middle brain
20 chr1:158967400-158968600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:158967400-158969400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:158967600-158969000 Enhancers Primary T killer memory cells from peripheral blood blood
23 chr1:158968000-158968200 Enhancers Primary T helper naive cells fromperipheralblood blood
24 chr1:158968000-158968400 Enhancers Primary mononuclear cells fromperipheralblood Blood
25 chr1:158968000-158968600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
26 chr1:158968000-158968600 Enhancers Brain Substantia Nigra brain
27 chr1:158968000-158968600 Enhancers Rectal Mucosa Donor 31 rectum
28 chr1:158968000-158969000 Enhancers Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015