Variant report

Variant rs7248540
Chromosome Location chr19:38877923-38877924
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38867000-38878000 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr19:38874800-38878000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr19:38874800-38878000 Weak transcription HepG2 liver
4 chr19:38874800-38878200 Weak transcription HSMMtube muscle
5 chr19:38875000-38878000 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr19:38875200-38878400 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
7 chr19:38875200-38878400 Weak transcription Aorta Aorta
8 chr19:38875800-38878000 Weak transcription Brain Angular Gyrus brain
9 chr19:38875800-38878200 Bivalent Enhancer Fetal Muscle Trunk muscle
10 chr19:38876200-38878000 Enhancers Primary T helper cells PMA-I stimulated --
11 chr19:38876200-38878000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
12 chr19:38876200-38880200 Enhancers Fetal Heart heart
13 chr19:38876400-38878000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr19:38876400-38880600 Active TSS iPS-15b Cell Line embryonic stem cell
15 chr19:38876600-38878200 Bivalent Enhancer Fetal Stomach stomach
16 chr19:38876600-38878600 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr19:38876600-38879200 Flanking Bivalent TSS/Enh Fetal Intestine Small intestine
18 chr19:38876800-38878000 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
19 chr19:38876800-38878000 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
20 chr19:38876800-38878000 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chr19:38876800-38878000 Bivalent Enhancer Placenta Amnion Placenta Amnion
22 chr19:38876800-38878200 Enhancers Primary T helper naive cells from peripheral blood blood
23 chr19:38876800-38878400 Bivalent Enhancer Fetal Thymus thymus
24 chr19:38876800-38879000 Flanking Active TSS Primary hematopoietic stem cells blood
25 chr19:38876800-38879200 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr19:38876800-38880200 Active TSS ES-WA7 Cell Line embryonic stem cell
27 chr19:38876800-38881400 Active TSS iPS-18 Cell Line embryonic stem cell
28 chr19:38877000-38878000 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
29 chr19:38877000-38878000 Enhancers Placenta Placenta
30 chr19:38877000-38878000 Enhancers Ovary ovary
31 chr19:38877000-38878000 Enhancers Pancreas Pancrea
32 chr19:38877000-38878200 Enhancers Right Ventricle heart
33 chr19:38877000-38878200 Enhancers Sigmoid Colon Sigmoid Colon
34 chr19:38877000-38879400 Enhancers Lung lung
35 chr19:38877200-38878000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr19:38877200-38878000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
37 chr19:38877200-38878000 Enhancers Muscle Satellite Cultured Cells --
38 chr19:38877200-38878000 Enhancers NHDF-Ad bronchial
39 chr19:38877200-38878200 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
40 chr19:38877200-38878200 Enhancers Left Ventricle heart
41 chr19:38877200-38878200 Enhancers NH-A brain
42 chr19:38877200-38879200 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
43 chr19:38877200-38880200 Flanking Active TSS Dnd41 blood
44 chr19:38877400-38878000 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr19:38877400-38878000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr19:38877400-38878000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr19:38877400-38878000 Bivalent Enhancer Fetal Brain Male brain
48 chr19:38877400-38878200 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr19:38877400-38878200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
50 chr19:38877400-38878200 Enhancers Psoas Muscle Psoas

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