The 2.0 version of rSNPBase

Variant report

Variant rs72620410
Chromosome Location chr22:32873699-32873700
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:32869800-32873800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr22:32870000-32874200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
3 chr22:32870200-32873800 Active TSS Brain Substantia Nigra brain
4 chr22:32871800-32874000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr22:32871800-32874200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr22:32871800-32874200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr22:32872000-32874000 Weak transcription Small Intestine intestine
8 chr22:32872000-32876200 Weak transcription Left Ventricle heart
9 chr22:32872000-32876400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr22:32872000-32878800 Weak transcription Spleen Spleen
11 chr22:32872000-32881000 Weak transcription Esophagus oesophagus
12 chr22:32872000-32881000 Weak transcription Lung lung
13 chr22:32872000-32881400 Weak transcription Placenta Amnion Placenta Amnion
14 chr22:32872000-32884400 Weak transcription Pancreas Pancrea
15 chr22:32872000-32884800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr22:32872000-32889000 Weak transcription Gastric stomach
17 chr22:32872000-32891000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr22:32872200-32874000 Flanking Active TSS Dnd41 blood
19 chr22:32872200-32875000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr22:32872200-32875800 Weak transcription Fetal Muscle Trunk muscle
21 chr22:32872200-32877600 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr22:32872200-32880000 Weak transcription Placenta Placenta
23 chr22:32872200-32882600 Weak transcription Colonic Mucosa Colon
24 chr22:32872200-32885200 Weak transcription Stomach Mucosa stomach
25 chr22:32872200-32886200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr22:32872200-32889000 Weak transcription Fetal Brain Male brain
27 chr22:32872200-32898200 Weak transcription ES-WA7 Cell Line embryonic stem cell
28 chr22:32872200-32898400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr22:32872200-32899600 Weak transcription H9 Cell Line embryonic stem cell
30 chr22:32872400-32874000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr22:32872400-32874000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
32 chr22:32872400-32875200 Enhancers Colon Smooth Muscle Colon
33 chr22:32872400-32875800 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr22:32872400-32881000 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr22:32872400-32881000 Weak transcription HSMMtube muscle
36 chr22:32872400-32881200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr22:32872600-32873800 Active TSS Brain Inferior Temporal Lobe brain
38 chr22:32872600-32874000 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr22:32872600-32874000 Enhancers Fetal Lung lung
40 chr22:32872600-32874200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
41 chr22:32872600-32875000 Enhancers Primary T cells from cord blood blood
42 chr22:32872600-32875000 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr22:32872600-32875000 Weak transcription Fetal Muscle Leg muscle
44 chr22:32872600-32880800 Weak transcription H1 Cell Line embryonic stem cell
45 chr22:32872600-32881000 Weak transcription Fetal Brain Female brain
46 chr22:32872800-32873800 Enhancers Fetal Heart heart
47 chr22:32872800-32874000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr22:32872800-32874000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
49 chr22:32872800-32874200 Enhancers Fetal Kidney kidney
50 chr22:32872800-32874400 Enhancers Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015