Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	REST	chr14:69764876-69766077	H1-neurons	neurons:	n/a	chr14:69765479-69765493
2	POLR2A	chr14:69765040-69765680	H1-neurons	neurons:	n/a	n/a
3	POLR2A	chr14:69765058-69765717	H1-neurons	neurons:	n/a	n/a

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ERH-2	chr14:69764391-69765317	NONHSAT037519

Variant related genes	Relation type
GALNT16	TF binding region

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10137786	0.81[ASN][1000 genomes]
rs1147473	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1147474	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1147475	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12232090	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12232103	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12232128	1.00[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12232144	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs12232207	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1378287	0.83[ASN][1000 genomes]
rs2185492	0.82[ASN][1000 genomes]
rs2331959	0.81[ASN][1000 genomes]
rs56184291	0.81[ASN][1000 genomes]
rs58870818	0.85[EUR][1000 genomes]
rs67740035	0.81[ASN][1000 genomes]
rs72625670	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs72625672	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs72625673	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs72625674	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs72625675	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs72625676	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs72625677	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs72625678	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs72625679	0.93[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs72625680	0.93[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs72722132	0.81[ASN][1000 genomes]
rs8019454	0.83[ASN][1000 genomes]
rs9672058	0.82[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69735800-69771600	Weak transcription	Fetal Intestine Small	intestine
2	chr14:69759200-69765200	Weak transcription	Right Atrium	heart
3	chr14:69764800-69765200	Bivalent Enhancer	Fetal Muscle Leg	muscle
4	chr14:69764800-69765400	Enhancers	Fetal Heart	heart
5	chr14:69764800-69765600	Enhancers	Fetal Brain Male	brain
6	chr14:69764800-69765800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr14:69764800-69765800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr14:69764800-69766000	Enhancers	Brain Inferior Temporal Lobe	brain
9	chr14:69764800-69766200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
10	chr14:69764800-69766200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
11	chr14:69764800-69766400	Enhancers	Left Ventricle	heart
12	chr14:69764800-69766400	Enhancers	Right Ventricle	heart
13	chr14:69764800-69767200	Enhancers	Cortex derived primary cultured neurospheres	brain
14	chr14:69764800-69767200	Enhancers	Brain Cingulate Gyrus	brain
15	chr14:69765000-69765400	Enhancers	Ovary	ovary
16	chr14:69765000-69765600	Enhancers	Brain Germinal Matrix	brain
17	chr14:69765000-69766000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr14:69765000-69767600	Enhancers	Fetal Muscle Trunk	muscle

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